Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2970 ATGTGCTCTGTCTTTCTCTCAAAGGCCCACCACTACCACGCACATAAATTCCCCTTCCCTTCACATTCTCTCTTCTCTCATCTTCCAAACAATTTTCACCAAAACTTAAGAATGCGTAATCAAAGGTCGGTGAAGCAAGAATTCCTGCGGAAATGGATAACAGGTCTTAGAAGATACAGCTGTGATGAGAAGAAGAACATGAGCTTCTTGGAGAGAAAGAAAGCCATAAAGCTCTCTGCAGATATAGCCATGGCTTCCACCAGGGACAAAACCACACGCTGGAGCCAGGCTCTTATTGCCAACGCTTCCAGTTCCGGAGACACGTTAACAGGATCCTCAAAGAACAATAGCAGCAGAAGCAGAAAGAAGATGTTGATGATGAGAAGGAGAAGGCCGAAGGTGAAGAGCGCGAAGAAGGAGATGTCAGCGAGTTGCATCGCCAAGAGGTTGGTGGAGAAGAGAACAAGAAAGCTGAAGAATCTGTTGCCAGGTGGAGAATCGATTGATGAGGGATGTTTGGTTGAAGAAACCCTAGATTACATAGAATCACTCAGAGCTCAAATTGAAGTTATGAGATACCTTGTCACTGCATCTCAACTCATCATAAATCCATATCCTTGA 621 0.4461 MCSVFLSKAHHYHAHKFPFPSHSLFSHLPNNFHQNLRMRNQRSVKQEFLRKWITGLRRYSCDEKKNMSFLERKKAIKLSADIAMASTRDKTTRWSQALIANASSSGDTLTGSSKNNSSRSRKKMLMMRRRRPKVKSAKKEMSASCIAKRLVEKRTRKLKNLLPGGESIDEGCLVEETLDYIESLRAQIEVMRYLVTASQLIINPYP* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2970 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 197 - -
Amo01g2970 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 42 197 IPR044660 GO:0006355
Amo01g2970 206 MobiDBLite consensus disorder prediction 104 130 - -
Amo01g2970 206 CDD bHLH_AtIBH1_like 143 195 IPR044549 GO:0006355
Amo01g2970 206 MobiDBLite consensus disorder prediction 104 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2970 38 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 40.110 6.13e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2970 - - lja:Lj0g3v0101119.1 186.037