Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2942 ATGTATGCCAGCCAGTTTGACGGCAACGCCGCCTTCTCCGGCGGCGGTTTCATGCCCTCTCAGACCACTCAGTCCCATGACTCTTCCTCCACCTTCKCTACTTCCAGAAATCGGGATGCTCAGTCGTTGCTACCTTTGACGGTGAAGCAGATAAACGATGCGTATAACTCGAGCGATAATAAATCCAATTTGATTGTCGATGGTGTTGATGTCAACACTGTTACACTCGTAGGAAGGGTATGCAACAAAAATGGGATGATTACTGAAGTTCATTTTGTCCTTGATGATGGCACTGGAAGGATTGAGTGTAATAAATGGCTTCAAGAAGCAGCGGAATCAAATGAAGTGGACGGTATCATGGATGGAGTATATGTGCGTCTTCATGGACAATTAAAAGGCCTTAATGGGAAAAGGATTTTGAATGTTTTCTCGTTTAGGCCTGTGACTGACTTTAATGAGATTGCCAGCCATTTCATTGAATGTATATATGTTCATCTCTACAATTCCAAGCTAAAGGCTGCTGTMCCTAACCAGCAACATGTTACAAATTCAACACCAATAACACCCACAAAAGGTTACCAAGTTCTCCCACCAAATCAATTCTCTGGTCWGCATAACAATGGTCAGCCGAGGTTCGAAGAAATGGTCCTGGATTTTTTGCATCTTCCCCCACACAGGTGCAAGTGGAAGCATGACTTGGATGCTTCCAATTCCACCGCCTCTTCCTCTTGTGGCTGA 738 0.4444 MYASQFDGNAAFSGGGFMPSQTTQSHDSSSTFXTSRNRDAQSLLPLTVKQINDAYNSSDNKSNLIVDGVDVNTVTLVGRVCNKNGMITEVHFVLDDGTGRIECNKWLQEAAESNEVDGIMDGVYVRLHGQLKGLNGKRILNVFSFRPVTDFNEIASHFIECIYVHLYNSKLKAAVPNQQHVTNSTPITPTKGYQVLPPNQFSGXHNNGQPRFEEMVLDFLHLPPHRCKWKHDLDASNSTASSSCG* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2942 245 MobiDBLite consensus disorder prediction 13 36 - -
Amo01g2942 245 CDD RPA2_DBD_D 73 166 - -
Amo01g2942 245 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 2 223 - -
Amo01g2942 245 PIRSF RPA32 1 241 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo01g2942 245 MobiDBLite consensus disorder prediction 182 207 - -
Amo01g2942 245 MobiDBLite consensus disorder prediction 15 36 - -
Amo01g2942 245 PANTHER REPLICATION PROTEIN A-RELATED 2 223 IPR040260 -
Amo01g2942 245 Gene3D - 35 170 IPR012340 -
Amo01g2942 245 SUPERFAMILY Nucleic acid-binding proteins 43 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2942 Amo-Chr1 100725952 100730049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2942 1 225 Core DNA Replication Machinery Family AT3G02920 49.785 4.39e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2942 K10739 - jre:108998915 305.834