Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2941 ATGTATGCCAGCCAGTTTGACGGCAACGCCGCCTTCTCCGGCGGCGGTTTCATGCCCTCTCAGACCACTCAGTCCCATGACTCTTCCTCCACCTTCACTACTTCCAGAATAAACGATGCGTATAACTCGAGCGATAATAAATCCAATTTGATTGTCGATGGTGTTGATGTCAACACTGTGGTATGCAACAAAAATGGGATGATTACTGAAGTTCATTTTGTCCTTGATGATGGCACTGGAAGGATTGAGTGTAATAAATGGCTTCAAGAAGCAGCGGAATCAAATGAAGTGGACGGTATCATGGATGGAGTGTATGTGCGTCTTCATGGACAATTAAAAGGCCTTAATGGGAAAAGGATTTTGAATGTTTTCTCATTTAGACCTGTGACTGACTTTAATGAGATTGCCAGCCATTTCATTGAATGTATATATGTCCATCTCTACAATTCCAAGCTAAAGGCTGCTGTGCCTAACCAGCAACATGTTACAAATTCAACACCAATAACACCCACAAAAGGTTACCAAGTTCTCCCACCAAATCAATTCTCTGGTCTGCATAACAATGGTCAGCCGAGGTTCGAAGAAATGGTCCTGGATTTTTTGCATCTTCCCCCACACAGGTTGGCTATCAAAAATCTTATTGATGAAGGCCAGATTTATGAAGCTATAAGTGATCACTATAAGTCAACCATCAATGGTTGA 702 0.4217 MYASQFDGNAAFSGGGFMPSQTTQSHDSSSTFTTSRINDAYNSSDNKSNLIVDGVDVNTVVCNKNGMITEVHFVLDDGTGRIECNKWLQEAAESNEVDGIMDGVYVRLHGQLKGLNGKRILNVFSFRPVTDFNEIASHFIECIYVHLYNSKLKAAVPNQQHVTNSTPITPTKGYQVLPPNQFSGLHNNGQPRFEEMVLDFLHLPPHRLAIKNLIDEGQIYEAISDHYKSTING* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2941 233 PANTHER REPLICATION PROTEIN A-RELATED 2 204 IPR040260 -
Amo01g2941 233 CDD RPA2_DBD_D 60 147 - -
Amo01g2941 233 Gene3D - 28 152 IPR012340 -
Amo01g2941 233 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 2 204 - -
Amo01g2941 233 SUPERFAMILY Nucleic acid-binding proteins 37 150 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2941 Amo-Chr1 100714126 100717295 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2941 1 206 Core DNA Replication Machinery Family AT3G02920 45.652 1.09e-61 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2941 K10739 - gmx:100782819 285.419