Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2925 ATGGAACCAACAAGAAACCTTGATCATCATCACGGTGGTGACCATCACTTTATTTTCCGTTCCAAGTTGCCCGACATTTACATCCCAACCCACCTCCCTCTCCACACTTACTGCTTTCAGAATCTCTCCCACTTCAAGGACCGTCCTTGCCTCATCAACGCCACCACCGGCGATACTTTCACCTACGCCGCCGTCGAACTAACCGCCAGAAAAGTCGCCGCCGGACTCAACAACCTAGGTGTTCGTCAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCACCAGTTTGTCTTCGCCTTCCTTGGCGCCTCCTACCGTGGCGCCATCGTCACCACCGCCAACCCGTTCTACACCCCCGCCGAGGTCGCCAAGCAGGCCACCGCCTCCGCTGCTAAGCTCATAATAACTCAGTCGTCCTTCGTCGACAAGGTAAAGGATCTGGCCAGGGACAAACACATCAAGGTCGTGTGCATCGACGCGCCGCCGCAGGGGTGCCTTGACTTCTCGGAGCTAACGGAGGCGGATGAGGGCGACATCCCTGCCGTCAAAATCTGCCCGGATGATGTAGTTGCGCTACCGTATTCGTCCGGCACGACGGGGCTCCCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTGACGAGCGTGGCGCAGCAGGTGGACGGAGAGAACCCCAATTTGTACATTAAGCGCGACGATGTGGTGGTTTGCGTGCTTCCGCTGTTCCACATTTACTCGCTGAATTCGGTTCTGCTGTGCGGGCTTCGAGTAGGGGCTGCAATCGTAATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTCAAGTGGTTGAGAAGCACAGGGTGAGCGTTGCGCCATTAGTGCCTCCGATCGTTCTGGCGATAGTAAAGAGCGGGGAGGTGACACGCTACGACTTATCGTCCATTCGGATGGTGATGTCCGGTGCGGCCCCATTGGGTAAGGACCTTCACGATGCTTTCAGGGACATGCTTCCTAATGCCACCTTTGGTCAGGGTTATGGGATGACGGAAGCAGGTCCGGTGCTTTCGATGTGCTTAGCGTTTGCAAAGGAACCTTTTGAGGTGATATCATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCAGAGATGAAGATTGTAGATCCTCTCACTGCTGCTTCCCTCCCCAGAAATCATGCCGGTGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGTTACTTAAACGACCCTAAGGCGACAGAAGATACCATAGACAAAGAGGGATGGTTGCACACGGGTGATATAGGATATATCGACGACAACGATGAGCTATTCATCGTTGACCGCTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTGGCTCCCGCTGAGCTCGAAGCTATGTTGATTTCTCACCCTAACCTTTCCGATGCAGCTGTTATAGCCATGAAAGATGAGGCAGCAGGAGAGGTTCCTGTTGCATTTGTTGTAAGATCAAACGCGTCTAAGATATCGGAGGATGAAATCAAGCTATATATCTCAAAGCAGGTTGTATTTTACAAGAGAATCAACAAAGTTTTCTTTGTGGATTCAATCCCAAAGGCACCGTCAGGTAAGATTTTACGAAAACACCTCAGAGCAAGGCTTGCATCTGGCCTTGAAATTTAG 1653 0.5185 MEPTRNLDHHHGGDHHFIFRSKLPDIYIPTHLPLHTYCFQNLSHFKDRPCLINATTGDTFTYAAVELTARKVAAGLNNLGVRQGDVILLLLQNCHQFVFAFLGASYRGAIVTTANPFYTPAEVAKQATASAAKLIITQSSFVDKVKDLARDKHIKVVCIDAPPQGCLDFSELTEADEGDIPAVKICPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIKRDDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLQVVEKHRVSVAPLVPPIVLAIVKSGEVTRYDLSSIRMVMSGAAPLGKDLHDAFRDMLPNATFGQGYGMTEAGPVLSMCLAFAKEPFEVISSGACGTVVRNAEMKIVDPLTAASLPRNHAGEICIRGNQIMKGYLNDPKATEDTIDKEGWLHTGDIGYIDDNDELFIVDRLKELIKYKGFQVAPAELEAMLISHPNLSDAAVIAMKDEAAGEVPVAFVVRSNASKISEDEIKLYISKQVVFYKRINKVFFVDSIPKAPSGKILRKHLRARLASGLEI* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2925 550 Pfam AMP-binding enzyme 41 450 IPR000873 -
Amo01g2925 550 SUPERFAMILY Acetyl-CoA synthetase-like 14 546 - -
Amo01g2925 550 CDD 4CL 28 540 - -
Amo01g2925 550 Gene3D - 445 546 IPR045851 -
Amo01g2925 550 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 14 544 - -
Amo01g2925 550 Gene3D - 10 444 IPR042099 -
Amo01g2925 550 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Amo01g2925 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 544 - -
Amo01g2925 550 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2925 Amo-Chr1 100573140 100578337 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2925 9 512 Monolignol Biosynthesis Gene Families AT1G51680 68.031 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2925 K01904 - gmx:100779668 877.856