Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2923 ATGGAATCTGCTACTGCCGCTCCCACTCAACAAGAATTCATCTTCCGATCCAAGCTTCCTGACATTCCCATCCCCACCCACCTTCCTCTCCATTCTTACTGCTTTCAGAATCTTCCACTCTTCCATGACCGCCCATGCCTCATCGACGCCGAAACCGCCACCACCCTAACCTATGCCGACGTCCACCTCGCCACCCGCCGCATCTCCGCCGGTCTCCACTCCATCGGCATCCGCAAGGGTGACGTCATCATGCTCGTCCTCCGCAACTGCCCCGAATTCGCCCTCGCTTTCCTTGGCGCCTCCCGCTGCGGCGCCCCRGTCACGACCGCCAACCCCTTCTACACTCCCGCCGAGCTGGCCAAGCAAGCCACCGCCACCAAAACTAAGCTCATCATAACGCAATCCGCMTACGTKGAGAAATTCAAAGAGTACCTGGAAACWAACAACAACGACGTCAAGATCATGTGCATTGATGGTTCCCCTGAAGAATCACAGGACACTAGTGTTCTGCACTTTTCCCTTCTCACAAATTCCAATGAAAACGACGAGCCTGAAGTTAACATCACCKCCGACGATCTCGTGGCGATCCCGTTCTCCTCCGGGACATCGGGGCTGCCAAAGGGGGTGATGTTAACGCACAGCAACCTGGTWACCACGGTGGCGCAACTTGTTGACGGCGAGAATCCTCATCAGTACACGCACAGCGAGGACGTTCTCCTCTGCGTGCTGCCAATGTTTCACATATACGCACTGAACTCGATCTTGTTATGTGGCATTCGAGCGGGTGCGGCGGTTCTGATCGTGCAGAAGTTTGAGATAACGACTCTGATGGAGTTGATAGAGAAGTACAGGGTGACGGTGGCGTCTCTGGTGCCGCCGATAGTGTTGGCGGTGGTGAAGAGTGGGGATACTCACAGGTATGATCTGTCTTCGATTCGTGGGGTGATATCAGGTGCCGCTCCCATGGGAATGGAGCTTCAGGAAGCTGTCAAGGCTAGGCTTCCCCATGCCATTCTCGGACAGGGTTATGGGATGACAGAAGCGGGGCCACTTGCCATAAGCTTAGCATTTGCAAAGGAACCATTCAACGTTAAATCAGGTGCATGCGGCTCCGTCGTTAGAAACGCTGAGATGAAAATCGTCGACACTGAAACTGGTACTTCCCTTCCACCAAACAAACCCGGTGAAATTTGCATTCGAGGCACTAAAGTCATGAAAGGGTACCTGAATGACCGAGAGGCGACGGAGAGAACCATAGACAAAGAAGGATGGTTACACACGGGTGACATTGGTTACATTGATGATGATGATGAGCTATTCATCGTTGATCGCTTGAAGGAGCTTATCAAATACAAAGGATACCAAGTGGCACCTGCTGAGCTGGAATCTTTGTTGATTGCCCACCCAAACATCTCTGATGCCGCTGTTGTACCGCTGAAAGATGAAGTTGCTGGAGAAGTACCAGTTGCATTTGTTGTGAGATCAAATGGTTCTAATATCACCGAGGATGAAATCAAGAAATATATTTCTAAACAGGTGGTATTTTACAAGAGAATAAACAGAGTGTTCTTCACTGAAAGTATTCCAAAAGCAGCGTCAGGAAAAATTCTGAGGAAGGTATTAACAGCAAGGCTTAACGAAGGTTTGGTGACCAATTAG 1659 0.5063 MESATAAPTQQEFIFRSKLPDIPIPTHLPLHSYCFQNLPLFHDRPCLIDAETATTLTYADVHLATRRISAGLHSIGIRKGDVIMLVLRNCPEFALAFLGASRCGAPVTTANPFYTPAELAKQATATKTKLIITQSAYVEKFKEYLETNNNDVKIMCIDGSPEESQDTSVLHFSLLTNSNENDEPEVNITXDDLVAIPFSSGTSGLPKGVMLTHSNLVTTVAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLMELIEKYRVTVASLVPPIVLAVVKSGDTHRYDLSSIRGVISGAAPMGMELQEAVKARLPHAILGQGYGMTEAGPLAISLAFAKEPFNVKSGACGSVVRNAEMKIVDTETGTSLPPNKPGEICIRGTKVMKGYLNDREATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGYQVAPAELESLLIAHPNISDAAVVPLKDEVAGEVPVAFVVRSNGSNITEDEIKKYISKQVVFYKRINRVFFTESIPKAASGKILRKVLTARLNEGLVTN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2923 552 Gene3D - 446 549 IPR045851 -
Amo01g2923 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 545 - -
Amo01g2923 552 SUPERFAMILY Acetyl-CoA synthetase-like 13 547 - -
Amo01g2923 552 CDD 4CL 24 541 - -
Amo01g2923 552 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Amo01g2923 552 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Amo01g2923 552 Pfam AMP-binding enzyme 42 451 IPR000873 -
Amo01g2923 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 9 545 - -
Amo01g2923 552 Gene3D - 6 445 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2923 Amo-Chr1 100556243 100561145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2923 12 513 Monolignol Biosynthesis Gene Families AT1G51680 64.822 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2923 K01904 - gmx:548034 885.56