Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2922 ATGCTATCTCGATCTTGCTTAGGGCTATTGAATTTGGTATCGGTGGATGATTACCAGGCACTGAGCCGYGTACCCAGCCTCATGGCGGTTCCGGGAGAACCCACCCGGGACTCATATCAGATCAGCCGTGACGGCCTCTCCAGCGGCGGATCCGACGACGCCGTTTCCCCTCCCCCTCAAGAACGCAGAATCATCGTTGCGAACCAACTCCCTATAAAAGCWACGCGCGATTCAGACACGAAGAAATGGATCTTCGAGTACGACGCCGACAGCCTGTATCTGCAGCTGAAGGAYGGGTTCCCCTCCGACGTGGAGGTCCTGTACGTAGGGTCCCTGAAGGCCGACGTGGAGGCTTCCGAGCAGGACGAGGTGTCGCAGGTGCTCCTAGAGCGGTTCCGGTGCGTGCCCACCTTCCTCCCTTGGGAAATTCAGAACAAATTCTACCATGGATTCTGCAAGCACTATCTGTGGCCCCTGTTYCATTACATGCTTCCCATGTCTCCCAGCCACGGCGCCCGCTTCGACCGCGCCCAGTGGCAGGCCTACGTCCTGGCCAACAAGATCTTCGCCGATAAGGTGACGGAGGTCATAAACCCCGACGAGGATTTCGTGTGGGTTCACGATTACCACCTGATGATACTGCCCACTTTCTTGAGGAAAAGGTTCCACCGCGTGAAGCTAGGRTTCTTCTTGCACAGYCCCTTCCCTTCTTCGGAAATCTACAGGACTCTACCTGTTCGTGATGACATACTGAGAGCCTTCTTGAACTGCGACCTGGTTGGTTTCCACACCTTCGATTACGCCAGACACTTCTTGTCCTGCTGCAGCAGGATGCTTGGTTTGGACTACGAGTCTAAAAGAGGTTACATTGGCTTGGATTATTATGGAAGAACCGTCACTATSAAGATTCTCCCCGTTGGGATTCACATGGGGCAGCTTCGCTCCGTGTTGTCTCTGCCGCGCACGGCCAAGAGGGTGGAGGAGTTGAAGGTGGAGTATGAGGGCAAGGTTGTCATTCTTGGCGTCGATGACATGGACTTGTTCAAAGGTATCAGCTTGAAGTTCTTGGCAATGGGGCAGCTTCTTGAGGTGCATGAGGCYYTGAGAGGGAAGGTTGTGTTGGTTCAGATTCTGAACCCCGCCAGGAGCTCAGGGAAGGATATTCAAGACGTCAAGAATGAGTCWGAGGCCCTTGCTAAGGAGATTAACGACAAATATGGTAGGCCWGGTTACCAGCCAATTGTGTTTGTGAATGGTCCAGTTTCAACGGAGGATAAGGCTGCTTACTATGCAATTTCCGAGTGTTGTGTGGTGAATGCGGTGAGGGATGGCATGAACTTGGTGCCTTACACATACACCGTTTGCAGGCAGATAGTTGAGAGTGAGAGGCCTAATCAGAGTGTTATCATTGTATCTGAGTTCATCGGTTGCTCWCCCTCCCTCAGCGGAGCAATCAGGGTCAATCCTTGGAACATTGATGATGTCTCCGAGGCTATGAACTCYGCCATCACAATGCCGGACGGGGAGAAGCATTTGCGCCACGAGAAGCATTACAAGTACATAAGCTCCCATGATGTGGCCTATTGGGCCAGGAGTTTTGATCAGGATTTGGAGAGGGCTTGYAGGGAGCATTACCTCAAGAGGTATTGGGGTGTTGGTTTTGGTCTYGGATTCAGGATCGTTGCTTTGGATCCTACCTTTAGGAAGCTCTCAGTCGATAACATTGTCTCTGCATACAAAGCTACACACAGCCGCTTGATCCTTTTGGACTATGATGGCACTATGTTGCCTCAGGCATCCATAAACAAGACCCCAAGTCCTGAGGTTYTATCTGTATTGAACTATTTATGCAGTGATCCCAAGAATATGGTGTTCATTGTGAGTGGCAGAGACAAGGATTGCCTCRGCAAGTGGTTTGATCCTTGTGACAAGTTGGGCCTCTCAGCAGAACATGGTTACTTCACTAGGTTGAGGAGGGATACTCCTTGGGAGACATGCGGGTTGACAACTGATTTTGACTGGAAGAAGATGGCAGAACCTGTGATGGCGCATTACACAGAGGCAACGGATGGTTCTTTCATTGAACACAAGGAGAGTGCAATGGTTTGGCACCATCAAGAAGCCGATCCTTATTTTGGATCATGCCAAGCCAAAGAGCTTCTTGATCACCTTGAGAATGTGCTGGCCAATGAGCCTGTSGTTGTTAAAAGGGGACAACACATAGTTGAAGTGAAACCTCAGGGTGTGAGCAAGGGTATAGTTGTGGARAATCTAATCTCAAGCATGAGGAGTGAGGGTAAATCACCAGATTTTCTGTTGTGCATTGGGGATGATCGATCAGATGAAGACATGTTCGAAAGCATTGCSCGTTCAGTTTCTAATCCAGCACTTCCAACAATATCACAAGTGTTTGCATGCACGGTTGGCCAGAAACCAAGCATGGCAAAGTACTATTTGGAGGATACTAGTGAAGTTATCAAATTGCTACAAGGACTTGCTACTGCATCAGCACCCTCAGCTTTTCAAGAATCGCAACAAGGATCACTATAG 2550 0.4969 MLSRSCLGLLNLVSVDDYQALSRVPSLMAVPGEPTRDSYQISRDGLSSGGSDDAVSPPPQERRIIVANQLPIKATRDSDTKKWIFEYDADSLYLQLKDGFPSDVEVLYVGSLKADVEASEQDEVSQVLLERFRCVPTFLPWEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDFVWVHDYHLMILPTFLRKRFHRVKLGFFLHSPFPSSEIYRTLPVRDDILRAFLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTXKILPVGIHMGQLRSVLSLPRTAKRVEELKVEYEGKVVILGVDDMDLFKGISLKFLAMGQLLEVHEALRGKVVLVQILNPARSSGKDIQDVKNESEALAKEINDKYGRPGYQPIVFVNGPVSTEDKAAYYAISECCVVNAVRDGMNLVPYTYTVCRQIVESERPNQSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAITMPDGEKHLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRYWGVGFGLGFRIVALDPTFRKLSVDNIVSAYKATHSRLILLDYDGTMLPQASINKTPSPEVLSVLNYLCSDPKNMVFIVSGRDKDCLXKWFDPCDKLGLSAEHGYFTRLRRDTPWETCGLTTDFDWKKMAEPVMAHYTEATDGSFIEHKESAMVWHHQEADPYFGSCQAKELLDHLENVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISSMRSEGKSPDFLLCIGDDRSDEDMFESIARSVSNPALPTISQVFACTVGQKPSMAKYYLEDTSEVIKLLQGLATASAPSAFQESQQGSL* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2922 849 Gene3D - 584 701 IPR023214 -
Amo01g2922 849 Gene3D - 714 846 IPR023214 -
Amo01g2922 849 SUPERFAMILY HAD-like 585 833 IPR036412 -
Amo01g2922 849 Pfam Trehalose-phosphatase 588 823 IPR003337 GO:0003824|GO:0005992
Amo01g2922 849 MobiDBLite consensus disorder prediction 32 60 - -
Amo01g2922 849 Gene3D Glycogen Phosphorylase B; 57 315 - -
Amo01g2922 849 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 838 IPR001830 GO:0003824|GO:0005992
Amo01g2922 849 CDD GT20_TPS 62 538 IPR001830 GO:0003824|GO:0005992
Amo01g2922 849 TIGRFAM T6PP: trehalose-phosphatase 584 833 IPR003337 GO:0003824|GO:0005992
Amo01g2922 849 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 838 - -
Amo01g2922 849 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 542 - -
Amo01g2922 849 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 586 790 IPR006379 -
Amo01g2922 849 CDD HAD_TPP 586 827 - -
Amo01g2922 849 Pfam Glycosyltransferase family 20 62 538 IPR001830 GO:0003824|GO:0005992
Amo01g2922 849 Gene3D Glycogen Phosphorylase B; 316 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2922 Amo-Chr1 100524452 100529026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2922 10 848 Trehalose Biosynthesis Gene Families AT2G18700 67.529 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2922 K16055 - gmx:100810498 1438.71