Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2914 ATGGGATCCTCCCTGAGTTGCTGTGGCTCTGACAAAATTGAAGAAGCAGCGCAAACAGCATTTGGTGCAGTTAACAACAATTCATGGAGAATATTCACATACAAGGAGCTGCATGCAGCTACAAATGGATTCAGTGAGGACAATAAGCTTGGTGAAGGTGGATTTGGAAGCGTGTATTGGGGAAAAACAAGTGATGGTCATGAGATAGCGGTGAAGAAACTGAAGGCAATGAACTCGAAGGCAGAGATGGAATTTGCTGTAGAAGTAGAAGTACTGGGAAGGGTTAGGCACAAGAATTTGTTGGGACTGAGAGGGTACTGTGCAGGGAATGAAGAAAGGCTTATAGTGTACGATTACATGGCGAATCTGAGCCTTCTTTCTCATCTGCATGGGCAGTTTACAAATGAAGTGCAACTGGATTGGAAAAGGAGAATGAAGATTGCAATTGGATCTGCAGAAGGTGTCTTGTATTTGCACCATGACGTCACACCACACATCATCCACAGAGACATCAAAGCAAGCAACGTTCTTCTCAACTCAGACTTCGAGCCGCTTGTTGCTGACTTCGGCTTCGCTAAGCTGATCCCCGAAGGGGTTAGCCACATGACTACCCGTGTTAAGGGCACTTTGGGATACTTGGCACCCGAATACGCCATGTGGGGAAAAGTCTCCGAGAGTTGCGATGTTTATAGCTTTGGGATTCTTCTGTTGGAGCTTGTAACTGGAAGAAAGCCGATTGAGAAGCTCCCTGGTGGGGTTAAGAGAACCATAACCGAATGGGCTGAGCCATTCATAAGTAAATCAAGGTTCGGGGATCTTGTTGATCCTAAACTCAGAGGTAACTTTGATGAGAATCAGGTGAAGCAAGCGATTCATGTGGCTGCACTTTGCGTGCAGAGTGAGCCTGATAAGAGACCCAACATGAAGCAAGTGGTTAACCTTCTCAAAGGGTATGAACCCAATCATAACGCTGTTTTGAACACTAGGCTTCACACTAGCCTAGCTATCTTCACAATGGTGCTTGCTTACCCTTCTAAGGTGCTAGTTGGACTCTCTTTGGACTCAGATGACAGCAAGGAGCTTCTCTCATGGGCAATAAGAGTCCTTGCCAATCCAAATGACAGCATTGTGGCAGTGCATGTTCTTGTTACTGAGGATAAGAAGAAGCGCGCCTCGGTCAGAAAGAGGCAATCACAACTTCGGCAAGCAAAGGCTCATGTCATATCTATGCTTGGAGAATTTGCACAAACATGTTGGTCTAAGCAGGTTAATCTGGAGGCAAGAGTGGCATTCAGTTCCACAGTAGGTGGAGGTTTAGCTGAGGAAGCCAAGTCCATCAATGCTGATTTTCTTCTTCTACGTGGCTCAAGAAATCCAAAAAACAAGAATGGAAGTTCCAAGGGAATTAGCAAGTATTGCTTTGAGCATGCACATGAAGGCTGCACTGTGGTCTCGGTTGGGAAATTCGCCAAGGCAGAGCAAGGTACCAGTTCAAATCCAAAGCATTCTCAAGATGACAGTGAAGCAAGTTCTAAATGGTTATCTAAGGATGATGACAATCAAGGTGACAAGGCTGCTACCTTCCCTGTTCTGAATGAATTCATGTCTGACTCTGAGTCTAAAGAACAGAACAGTTCGCCAAGAACAGTACTAGATGCGCTGGAAGGGCAATCTAACAGCACAGAAGATGATACATTCAGCACTATGGTCTCAAGCACCTGCACCACAGATACACCTAAGAGAAGATCAAAGCCTCAATCTCCCTTGAGGCGCATAGCCTCCTTCCTCGGATCACCATTCCGAAGAAAACATAGCATGTCCAAGAATGAAAAGGCTCAGCCCTTGTTGAAGTGCTTCAGCTATGAGCAGATAGCCAATGCTACTAATGAATTCCACCAAGATAATTTGGTCGGGAGAGGCGGATACTCAGAAGTATACAAAGGTGATCTTTGTGATGGAAGAAGCATTGCTGTGAAGAGATTGGCGAAGGACAACAATGATCCTAACAAGGAGAAAGAGTTCCTCATGGAATTGGGAGTTATTGGACATGTCTGCCATCCTAACACTGCATCCTTAGTTGGATGCTGCGTCGAAAATGGACTCTATCTAGTCTTCAATTACTCTCAGAATGGAAACTTGGCAACTGCATTGCACGGTGGAGATTCACTTGACTGGCCAATCAGATACAAGATTGCTATTGGAGTTGCAAGGGGGCTCCATTACCTTCATAAATGTTGCAAACACAGGATAATTCATCGCGATATCAAAGCTTCCAATGTTCTTCTAGGCCCTGATTATGAGCCACAGATAACAGATTTTGGGCTTGCAAAGTGGCTTCCAAACAAGTGGAGTCATCATGCAGTGATCCCAGTAGAGGGGACATTCGGATACTTAGCACCAGAGTACTTCATGCATGGAATAGTGGATGAGAAAACAGATGTTTTTGCATTTGGTGTTCTTCTTCTTGAGATTGTAACTGGACGCAGACCTGTTGATTCATCAAGCCAAAATCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCAGGGAATATTGGAGAGCTAGCTGATCCAAAAATGGATGGTAAATATGATGAAGAGCAACTCTATAGGTTGGTGCTTACAGCTTCATACTGTGTCAGACAAAATGCCACGTGGCGCCCTCCAATGAGCGAGGTGTTAGAGTTGCTGGCAAGTGGGAATGACTGTGAGGCAGGGAAAAGTTGGAGGATCCCAAAATTCACTTCAGATGAATTGGATGATTATTCTATGGTGTTTGGATATGATGTCCCCTCACACATATCTCTCGAGGATTTTCTCTGA 2820 0.4496 MGSSLSCCGSDKIEEAAQTAFGAVNNNSWRIFTYKELHAATNGFSEDNKLGEGGFGSVYWGKTSDGHEIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGNEERLIVYDYMANLSLLSHLHGQFTNEVQLDWKRRMKIAIGSAEGVLYLHHDVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGVKRTITEWAEPFISKSRFGDLVDPKLRGNFDENQVKQAIHVAALCVQSEPDKRPNMKQVVNLLKGYEPNHNAVLNTRLHTSLAIFTMVLAYPSKVLVGLSLDSDDSKELLSWAIRVLANPNDSIVAVHVLVTEDKKKRASVRKRQSQLRQAKAHVISMLGEFAQTCWSKQVNLEARVAFSSTVGGGLAEEAKSINADFLLLRGSRNPKNKNGSSKGISKYCFEHAHEGCTVVSVGKFAKAEQGTSSNPKHSQDDSEASSKWLSKDDDNQGDKAATFPVLNEFMSDSESKEQNSSPRTVLDALEGQSNSTEDDTFSTMVSSTCTTDTPKRRSKPQSPLRRIASFLGSPFRRKHSMSKNEKAQPLLKCFSYEQIANATNEFHQDNLVGRGGYSEVYKGDLCDGRSIAVKRLAKDNNDPNKEKEFLMELGVIGHVCHPNTASLVGCCVENGLYLVFNYSQNGNLATALHGGDSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWSHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIVTGRRPVDSSSQNLLLWAKPLMESGNIGELADPKMDGKYDEEQLYRLVLTASYCVRQNATWRPPMSEVLELLASGNDCEAGKSWRIPKFTSDELDDYSMVFGYDVPSHISLEDFL* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2914 939 Pfam Protein kinase domain 631 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2914 939 SUPERFAMILY Protein kinase-like (PK-like) 28 329 IPR011009 -
Amo01g2914 939 ProSiteProfiles Protein kinase domain profile. 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2914 939 CDD USP_Like 346 486 - -
Amo01g2914 939 CDD STKc_IRAK 50 317 - -
Amo01g2914 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Amo01g2914 939 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
Amo01g2914 939 MobiDBLite consensus disorder prediction 555 590 - -
Amo01g2914 939 PANTHER OS08G0249100 PROTEIN 344 929 - -
Amo01g2914 939 PANTHER OS08G0249100 PROTEIN 24 322 - -
Amo01g2914 939 Pfam Protein tyrosine and serine/threonine kinase 47 315 IPR001245 GO:0004672|GO:0006468
Amo01g2914 939 Gene3D Transferase(Phosphotransferase) domain 1 709 908 - -
Amo01g2914 939 ProSitePatterns Protein kinases ATP-binding region signature. 637 659 IPR017441 GO:0005524
Amo01g2914 939 ProSiteProfiles Protein kinase domain profile. 631 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2914 939 Gene3D Transferase(Phosphotransferase) domain 1 120 327 - -
Amo01g2914 939 Gene3D Phosphorylase Kinase; domain 1 594 707 - -
Amo01g2914 939 Gene3D Phosphorylase Kinase; domain 1 14 119 - -
Amo01g2914 939 Gene3D HUPs 337 486 IPR014729 -
Amo01g2914 939 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 345 478 - -
Amo01g2914 939 MobiDBLite consensus disorder prediction 505 523 - -
Amo01g2914 939 PANTHER OS08G0249100 PROTEIN 344 929 - -
Amo01g2914 939 PANTHER OS08G0249100 PROTEIN 24 322 - -
Amo01g2914 939 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Amo01g2914 939 SMART serkin_6 631 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2914 939 SMART serkin_6 44 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2914 939 Pfam Universal stress protein family 346 484 IPR006016 -
Amo01g2914 939 MobiDBLite consensus disorder prediction 493 524 - -
Amo01g2914 939 SUPERFAMILY Protein kinase-like (PK-like) 605 896 IPR011009 -
Amo01g2914 939 MobiDBLite consensus disorder prediction 555 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2914 Amo-Chr1 100342482 100349444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2914 619 896 Trihelix Transcription Factor Family AT5G38560 42.414 6.37e-65 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Amo01g2914 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2914 - - ccaj:109809416 976.467