Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2899 ATGGAATCTGCTACAGCCGCTCCCACTCAACAAGAATTCATCTTCCGATCCAAGCTTCCTGACATTCCCATCCCCACCCACCTTCCTCTCCATTCTTACTGCTTTCAGAATCTTCCACTCTTCCATGACCGCCCGTGCCTCATCGACGCCGAAACCGCCACCACGCTAACCTATGCCGACGTCCACCTCGCCACCCGCCGCATCTCCGCCGGTCTCCACTCCATCGGCATCCGCAAGGGTGACGTCATCATGCTCGTCCTCCGCAACTGCCCCGAATTCGCCCTCGCTTTCCTTGGCGCCTCCCGCTGCGGCGCCCCCGTCACGACCGCCAACCCCTTCTACACTCCCGCCGAGCTGGCCAAGCAAGCCACCGCCACCAAAACTAAGCTCATCATAACGCAATCCGCTTACGTCGAGAAATTCAAAGAGTACCTGGAAACAAACAACAACGACGTCAAGATCATGTGCATTGATGGTTCCCCTGAAGAATCACAGGACACTAGTGTTCTGCACTTTTCCCTTCTCACAAATTCCAATGAAAACGACGAGCCTGAAGTTAACATCACCCCCGACGATCTCGTGGCGATCCCGTTCTCCTCCGGGACATCGGGGCTGCCAAAGGGGGTGATGTTAACGCACAGCAACCTGGTAACCACGGTGGCGCAACTTGTTGACGGCGAGAATCCTCATCAGTACACGCACAGCGAGGACGTTCTCCTCTGCGTGCTGCCAATGTTTCACATATACGCACTGAACTCGATCTTGTTATGTGGCATTCGAGCGGGTGCGGCGGTTCTGATCGTGCAGAAGTTTGAGATAACGACTCTGATGGAGTTGATAGAGAAGTACAGGGTGACGGTGGCGTCTCTGGTGCCGCCGATAGTGTTGGCGGTGGTGAAGAGTGGGGATACTCACAGGTATGATCTGTCTTCGATTCGTGGGGTGATATCAGGTGCCGCTCCCATGGGAATGGAGCTTCAGGAAGCTGGCTATGGGATGACAGAAGCGGGGCCACTTGCCATAAGCTTAGCATTTGCAAAGGAACCATTCAACGTTAAATCAGGTGCATGCGGCTCCGTCGTTAGAAACGCTGAGATGAAAATCGTCGACACTGACACTGGTACTTCCCTTCCACCTAACAAACCCGGTGAAATTTGCATTCGAGGCACTAAAGTCATGAAAGGGTACCTGAATGACCGAGAGGCGACGGAGAGAACCATAGACAAAGAAGGATGGTTACACACGGGTGACATTGGTTACATTGATGATGATGATGAGCTCTTCATCGTTGATCGCTTGAAGGAGCTTATCAAATACAAAGGATACCAAGTGGCACCTGCTGAGCTGGAATCTTTGTTGATTGCCCACCCAAACATCTCTGATGCCGCTGTTGTACCGCTGAAAGATGAAGTTGCTGGAGAAGTACCAGTTGCATTTGTTGTGAGATCAAATGGTTCTAATATCACCGAGGATGAAATCAAGAAATATATTTCTAAACAGGTGGTATTTTACAAGAGAATAAACAGAGTGTTCTTCACTGAAAGTATTCCAAAAGCAGCGTCAGGTAAAATTCTGAGGAAGGTATTAACAGCAAGGCTTAACGAAGGTTTGGTGACCAATTAG 1623 0.5089 MESATAAPTQQEFIFRSKLPDIPIPTHLPLHSYCFQNLPLFHDRPCLIDAETATTLTYADVHLATRRISAGLHSIGIRKGDVIMLVLRNCPEFALAFLGASRCGAPVTTANPFYTPAELAKQATATKTKLIITQSAYVEKFKEYLETNNNDVKIMCIDGSPEESQDTSVLHFSLLTNSNENDEPEVNITPDDLVAIPFSSGTSGLPKGVMLTHSNLVTTVAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLMELIEKYRVTVASLVPPIVLAVVKSGDTHRYDLSSIRGVISGAAPMGMELQEAGYGMTEAGPLAISLAFAKEPFNVKSGACGSVVRNAEMKIVDTDTGTSLPPNKPGEICIRGTKVMKGYLNDREATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGYQVAPAELESLLIAHPNISDAAVVPLKDEVAGEVPVAFVVRSNGSNITEDEIKKYISKQVVFYKRINRVFFTESIPKAASGKILRKVLTARLNEGLVTN* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2899 540 CDD 4CL 24 529 - -
Amo01g2899 540 Pfam AMP-binding enzyme C-terminal domain 448 523 IPR025110 -
Amo01g2899 540 Gene3D - 434 537 IPR045851 -
Amo01g2899 540 SUPERFAMILY Acetyl-CoA synthetase-like 13 535 - -
Amo01g2899 540 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Amo01g2899 540 Gene3D - 6 433 IPR042099 -
Amo01g2899 540 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 9 533 - -
Amo01g2899 540 Pfam AMP-binding enzyme 42 439 IPR000873 -
Amo01g2899 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2899 Amo-Chr1 100102123 100106369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2899 12 501 Monolignol Biosynthesis Gene Families AT1G51680 63.834 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2899 K01904 - gmx:548034 859.366