Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2898 ATGGAACCAACAAGAAACCATGATCATCATCACGGTGGTGACCATCACTTTATTTTCCGTTCCAAGCTGCCCGACATTTACATCCCAACCCACCTCCCTCTCCACACTTACTGCTTTCAGAATCTCTCCCACTTCAAGGACCGTCCTTGCCTCATCAACGCCACCACCGGCGTTACTTTCACCTACGCCGCCGTCGAACTAACCGCCAGAAAAGTCGCCGCCGGACTCAACAACCTAGGTGTTCGTCAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCACCAGTTTGTCTTCGCCTTCCTTGGCGCCTCCTACCGTGGTGCCATCGTCACCACCGCCAACCCCTTCTACACCCCCGCCGAGGTCGCCAAGCAGGCCACCGCCTCCGCTGCTAAGCTCATAATAACTCAGTCGTCGTTCGTGGACAAGGTAAAGGATCTGGCCAGGGACAAACACATCAAGGTCGTGTGCATCGACGCGCCGCCGCAGGGGTGCCTTGACTTCTCGGAGCTAACAGAGGCGGATGAGGGCGACATCCCTGCCGTGAAAATCTTCCCGGATGATGTAGTTGCGCTGCCGTATTCGTCCGGCACGACGGGGCTCCCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTGACGAGCGTGGCTCAGCAGGTGGACGGAGAGAACCCCAATCTGTACATTCAGCACGATGATGTGGTGGTTTGCGTGCTTCCACTGTTCCACATTTACTCGCTGAATTCGGTTCTGCTGTGCGGGCTTCGAGTAGGGGCTGCAATAGTGATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTCAAGTGGTTGAGAAGCACAGGGTGAGCGTTGCGCCATTAGTGCCTCCGATTGTTCTTGCGATAGTAAAGAGCCGGGAGGTGACACGCTACGACTTATCGTCCATTCGGATGGTGATGTCCGGTGCGGCCCCATTGGCCTTTAGGATTCGTAAATCCGGTGTGTCCTTGATGAGCAAGCAATGTTACGAAACTGCCCTCGCTCAACACAATAAGCATGATAAGATTATTAGAGCGTCAGGTCCAGTGCTTTCGATGTGTTTAGCGTTTGCAAAGGAACCTTTTGAGGTGAAATCATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCAGAGATGAAGATTGTGGATCCTCTCACGGCTGCTTCCCTCCCCAGAAATCATGCCGGTGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGTTACTTAAACGACCCTAAGGCGACAGAAGATACCATAGACAAAGAGGGATGGTTGCACACGGGTGATATAGGATATATGGACGACAACGATGAGCTATTCATCGTTGACCGCTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTGGCTCCCGCTGAGCTCGAAGCTATGTTGATTTCTCACCCTAACATTTCCGATGCAGCTGTTATAGCCATGAAAGATGAGGCAGCAGGAGAGGTTCCTGTTGCATTTGTTGTAAGATCAAACGCGTCTAAGATATCGGAGGATGAAATCAAGCTATATATCTCAAAGCAGGCACCGTCAGGTAAGATTTTACGAAAACACCTCAGAGCAAGGCTTGCATCTGGCCTTGAAATTTAG 1623 0.5163 MEPTRNHDHHHGGDHHFIFRSKLPDIYIPTHLPLHTYCFQNLSHFKDRPCLINATTGVTFTYAAVELTARKVAAGLNNLGVRQGDVILLLLQNCHQFVFAFLGASYRGAIVTTANPFYTPAEVAKQATASAAKLIITQSSFVDKVKDLARDKHIKVVCIDAPPQGCLDFSELTEADEGDIPAVKIFPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIQHDDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLQVVEKHRVSVAPLVPPIVLAIVKSREVTRYDLSSIRMVMSGAAPLAFRIRKSGVSLMSKQCYETALAQHNKHDKIIRASGPVLSMCLAFAKEPFEVKSSGACGTVVRNAEMKIVDPLTAASLPRNHAGEICIRGNQIMKGYLNDPKATEDTIDKEGWLHTGDIGYMDDNDELFIVDRLKELIKYKGFQVAPAELEAMLISHPNISDAAVIAMKDEAAGEVPVAFVVRSNASKISEDEIKLYISKQAPSGKILRKHLRARLASGLEI* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2898 540 SUPERFAMILY Acetyl-CoA synthetase-like 15 536 - -
Amo01g2898 540 Pfam AMP-binding enzyme 41 458 IPR000873 -
Amo01g2898 540 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 521 - -
Amo01g2898 540 CDD 4CL 28 530 - -
Amo01g2898 540 Gene3D - 453 535 IPR045851 -
Amo01g2898 540 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 14 521 - -
Amo01g2898 540 Pfam AMP-binding enzyme C-terminal domain 467 522 IPR025110 -
Amo01g2898 540 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Amo01g2898 540 Gene3D - 10 452 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2898 Amo-Chr1 100082169 100085681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2898 9 522 Monolignol Biosynthesis Gene Families AT1G51680 64.054 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2898 K01904 - gmx:100779668 786.563