Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2859 ATGGAGAATGAGGAGGGGAAGAAGAAGTGGGAGAAGAGCTACTTCGATGTGATGGGATTGTGCTGCTCGTCGGAGGTGCCGCTCATAGAGAACATACTCAAACCTTTGCAAGGAGTGAAGGAGGTTTCGGTCATTGTACCAACTCGTACTGTTATTGTTATCCATGACTCTCTCATCATTTCTCAGCTCCAAATTGTCAAGGTTCTTAATCAAGCAAGACTAGAAGCAAATGCCAGAGTGTATGGGGACCAAAAGCACCAAAAGCAATGGCCAAGCCTATACTCAATTGTGTGTGGTTTGCTACTTTTGCTTTCCTTGCTCAAGTTTGTGTACCATCCATTGCAGTATCTCGCTCTCGGAGCGGTTGCTGCCGGTATATTTCCGATCGCCTGGAAGGCTATTGTCTCCATCCAGAACCTTAGACTTGACATTAACATTCTCATGATCATAGCAGTTATTGGGACAATTGCTATGAATGATTATTTGGAGGCAGGAACAATAGTTTTTCTCTTCTCTATTGCTGAATGGCTTGAATCCAGGGCAAGCCACAAGGCAAATGCGGTTATGTCATCACTGATGAACATAGCTCCTCAAAAAGCAGTGATAGCTGAAACAGGAGAGGTTGTTGATGCTGATGAGGTCAAAGTCAACACGATCTTAGCAGTGAAGGCAGGGGAAGTGATCCCAATTGATGGTGTGGTTGTTGATGGAACCTGTGAGGTTGATGAAAAAACTTTGACAGGGGAATCATTCCCAGTAGCAAAACAAAAAGACTCAACTGTTTGGGCTGGGACCATTAACTTAAATGGTTACGTTAGTGTTAAAACTACTGCATTGGCTGAGGATTGTGTTGTGGCTAAAATGGCAAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACCAGCACTCAGAGATTGATTGACAAATTTGCCAAATTTTACACCCCTGCTGTTGTAATCATATCAGCACTAGTAGCTGTGATTCCAATTGCATTAAAAGTACACGACAAGAAACACTGGCTTCATTTTGCACTTGTTGTCTTAGTAAGTGCATGCCCATGTGCACTTATCCTTTCAACACCAGTTGCTACTTTTTGTGCCTACACAAAAGCAGCTACGTCTGGTCTCCTCATCAAAGGTGGTGATTATCTTGAAACACTTGCAAAAATTAAGGTCATGGCTTTCGACAAAACTGGTACCATAACAAAGGGGGAGTTTGTGGTGACGAATTTTGTCTCTCTTTCAGATGACATTGATTTGAACACATTGCTTTACTGGGTGTCAAGTATTGAGAGTAAGTCAAGCCATCCATTGGCAGCAGCTATTGTTGATTATGGAAGGTCTCTCTCCATTGAACCAAACCCAGAAAATGTTACAGAATTCGAAAATTTTCCTGGAGAAGGAATATATGGAAAAATTGAAGAGAGACTTGTTTACGTTGGAAACAAAAAAATTGCAACTAGAGCTGGCTCAGAAATAGTGCCTGCAATGCATGGTCAAATAGGAAAGACCACAGGATACATATATTGTGGAGCAACCCCAGTTGGATTCTTCTCTCTATCGGATGCTTGTCGAACCGGTGTTCCAGAGGCAATAGCTCAGCTCAAGTCATTGGGAATCAAAACTGCTATGCTCACTGGAGACAGTCAAGGAGCTGCTATGCAAGCACAGGAACAGCTAGGGAATGCTCTGGAGTTGGTCCATGCAGAACTTTTGCCAGAAGACAAGTTAAAGATCATCACAGAATTCAAGAAGGAAGGGCCAACAGCAATGGTTGGAGACGGTTTGAATGATGCGCCGGCGTTAGCTACGGCTGATATAGGAATCTCAATGGGGATTTCAGGTTCTGCACTGGCTAGTGAGACTGGGAACATAATTCTTATGTCAAATGACCTTAGGAAGATTCCCGAAGTGATTAAGCTTGCGAAAAAGTCGCATAGGAAAGTGATACAGAATATCTTTTTGTCTGTGATTACCAAGGCTGCAATTATTGGTTTGGCCATTGGTGGTCACCCACTTGTTTGGGCTGCAGTTCTTGCTGATGTTGGAACATGTTTGGTTGTCATCTTGAACAGCATGTTACTCCTTAGAGGAGAACATAATCATGGAGAACACAATCATGGAGAACACAAGCATGGAAATCATGACCATGGAACACACAAACATGGAGGGAACAAGCATGGTGAACACAAGCACGGAGGAAAATGTTGTAGACCTTCCCCTGAAGTTCATGTCCAGAAAGATGTATGTGGTGGAACCGATGGTGACTCCTCTCACCATCATGATCATCATCATGGAAAATTCTCTCATCATCATCACCACCACCATCACCACCACCATCACCACGAACAACTACATCAACATAAACATCATAGCCATAAGCATTGTGGCTCAGAGGAGACAAAACAGGTGTCTCTGCCTCAGAAGTGTGCCTCTGAGACGTGCTCCTCAAAGAATGAACCCTGCCCTTCGGATTCAAGATTAGATGGAAGTGTCAAGCATCATAATGTCATGGGAAGTCATGAACATTGTAAGGGAAAAGATGAATTTCATGAACATTGTAAGGGTCATCAGAAGCATGATCATATTGAAGACCATTGTCGTTCAGAAACGCACAATGTTATTCCAAATGCAGAAAACAATGGTGCATTACATAGTTCTCATTGCCATGGGACAGAGCACTGCCACAAAGAGACTGACATAGCTACTCATGAACAGGAATCATCACATAGTTCTCACAATCACATGATCCATGGTTGTGAAAATCCAAAAGGCCACAACCCGGATCGAAATTCAGGTTCCCATTTTGAAATTGAGAAGGCAGGGACAAGTGAAATAACTATTGACATAGATGATGATGTCGAATCGGCCTCAAAGCACGGCTGCTGCATGGAAGAGGAAGAAAACGATTCGTACTGCGATGGTTGCTCGGACAAATGCAAAGAACTTCCAGTGGCTTGTGATTGCGAGGGCTCAAATGAGGCACAAGTCATTAGTTCATGCTGTAGCAGCAATGAGGGAACTACAAAAGAATGCAGAGATTCCACAATTGTGCATGCTTGTATTAGTCTAAACAAGAGAGGGTATGGGGGTTGGGGATGCTGCAAGAGTTACATGAAGGAATGCTGTGCCGAGAAGCATAGACATTCTGGTGCCGGTTTTGGAGGAGGTTTGTCAGAGATCATTACAGAATATGTTTAG 3198 0.4325 MENEEGKKKWEKSYFDVMGLCCSSEVPLIENILKPLQGVKEVSVIVPTRTVIVIHDSLIISQLQIVKVLNQARLEANARVYGDQKHQKQWPSLYSIVCGLLLLLSLLKFVYHPLQYLALGAVAAGIFPIAWKAIVSIQNLRLDINILMIIAVIGTIAMNDYLEAGTIVFLFSIAEWLESRASHKANAVMSSLMNIAPQKAVIAETGEVVDADEVKVNTILAVKAGEVIPIDGVVVDGTCEVDEKTLTGESFPVAKQKDSTVWAGTINLNGYVSVKTTALAEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVIISALVAVIPIALKVHDKKHWLHFALVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGDYLETLAKIKVMAFDKTGTITKGEFVVTNFVSLSDDIDLNTLLYWVSSIESKSSHPLAAAIVDYGRSLSIEPNPENVTEFENFPGEGIYGKIEERLVYVGNKKIATRAGSEIVPAMHGQIGKTTGYIYCGATPVGFFSLSDACRTGVPEAIAQLKSLGIKTAMLTGDSQGAAMQAQEQLGNALELVHAELLPEDKLKIITEFKKEGPTAMVGDGLNDAPALATADIGISMGISGSALASETGNIILMSNDLRKIPEVIKLAKKSHRKVIQNIFLSVITKAAIIGLAIGGHPLVWAAVLADVGTCLVVILNSMLLLRGEHNHGEHNHGEHKHGNHDHGTHKHGGNKHGEHKHGGKCCRPSPEVHVQKDVCGGTDGDSSHHHDHHHGKFSHHHHHHHHHHHHHEQLHQHKHHSHKHCGSEETKQVSLPQKCASETCSSKNEPCPSDSRLDGSVKHHNVMGSHEHCKGKDEFHEHCKGHQKHDHIEDHCRSETHNVIPNAENNGALHSSHCHGTEHCHKETDIATHEQESSHSSHNHMIHGCENPKGHNPDRNSGSHFEIEKAGTSEITIDIDDDVESASKHGCCMEEEENDSYCDGCSDKCKELPVACDCEGSNEAQVISSCCSSNEGTTKECRDSTIVHACISLNKRGYGGWGCCKSYMKECCAEKHRHSGAGFGGGLSEIITEYV* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2859 1065 MobiDBLite consensus disorder prediction 749 800 - -
Amo01g2859 1065 MobiDBLite consensus disorder prediction 713 732 - -
Amo01g2859 1065 SFLD C1.7: P-type atpase like 376 643 - -
Amo01g2859 1065 SUPERFAMILY HAD-like 392 692 IPR036412 -
Amo01g2859 1065 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 2 700 - -
Amo01g2859 1065 Pfam haloacid dehalogenase-like hydrolase 389 605 - -
Amo01g2859 1065 Pfam E1-E2 ATPase 203 371 - -
Amo01g2859 1065 MobiDBLite consensus disorder prediction 700 737 - -
Amo01g2859 1065 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 144 696 - -
Amo01g2859 1065 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 2 700 - -
Amo01g2859 1065 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 144 694 IPR027256 GO:0006812|GO:0016021|GO:0019829
Amo01g2859 1065 ProSitePatterns E1-E2 ATPases phosphorylation site. 395 401 IPR018303 -
Amo01g2859 1065 MobiDBLite consensus disorder prediction 813 832 - -
Amo01g2859 1065 SUPERFAMILY Calcium ATPase, transmembrane domain M 144 387 IPR023298 -
Amo01g2859 1065 MobiDBLite consensus disorder prediction 762 792 - -
Amo01g2859 1065 Gene3D - 7 80 - -
Amo01g2859 1065 Gene3D - 182 296 - -
Amo01g2859 1065 SUPERFAMILY HMA, heavy metal-associated domain 10 76 IPR036163 GO:0046872
Amo01g2859 1065 ProSiteProfiles Heavy-metal-associated domain profile. 12 78 IPR006121 GO:0046872
Amo01g2859 1065 SUPERFAMILY Calcium ATPase, transduction domain A 207 292 IPR008250 -
Amo01g2859 1065 CDD P-type_ATPase_HM 117 693 - -
Amo01g2859 1065 Gene3D - 384 642 IPR023214 -
Amo01g2859 1065 PRINTS P-type cation-transporting ATPase superfamily signature 393 407 - -
Amo01g2859 1065 PRINTS P-type cation-transporting ATPase superfamily signature 537 547 - -
Amo01g2859 1065 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Amo01g2859 1065 PRINTS P-type cation-transporting ATPase superfamily signature 242 256 - -
Amo01g2859 1065 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Amo01g2859 1065 Gene3D - 404 523 IPR023299 GO:0000166
Amo01g2859 1065 SFLD p-type atpase 376 643 IPR044492 -
Amo01g2859 1065 PRINTS Copper-transporting ATPase signature 184 202 - -
Amo01g2859 1065 PRINTS Copper-transporting ATPase signature 315 329 - -
Amo01g2859 1065 PRINTS Copper-transporting ATPase signature 569 586 - -
Amo01g2859 1065 PRINTS Copper-transporting ATPase signature 626 640 - -
Amo01g2859 1065 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 167 669 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2859 Amo-Chr1 99595080 99604205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2859 8 809 Primary Pumps ATPases AT4G30110 61.249 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2859 K01534 - gmx:100817567 1249.19