Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2839 GCCCATCATCCCGCGAAGCTCACTGATCTAAACACGTTTCCCTTCCTCCCTCATTCACTCACTCAGTCACTCACTAATATTTGCCGCTCAAACTCTCGTGCTTCGTTGGCGGCTTCAGCTCTCCTTCCTTCCGCTGTAGTAATGGATACTGGAGAGGAGTACTCACTTGTTATTGAACTATCTGAAAACGATCTTTTCTTTGAACAAAAGAAGAAATTACTAGAAAATAAGGGTTTTCGACCCAAGGAACGAATATACCTCAAGGATACCTCAAAGCCTGGTTGGGTGAATGCTACCGTAAAGGTTTTACTGCAGATTGCGCGAATTATACAGTTAAATGAGCTGGAACTTTATTTTGCCGAAGATGATGGATGTCCTTTAGTGGAGTTTTACAGCCCCAGGAATGAGTTAGAGGCTTTCGATTCAATTCTTTCACTTGTTGACATATCACTTTCTTCTTGTACAAATCTCCATACAAATATCCTGGAATTGTTACGACAAACAATTCTTGATTTGATTTCTGATTTTGGGGATAAGAATAGTGTGAAGGGAATAGTTGAAAGAGACCATGGTATTGACCAGGAAGAACGCCTGATAAAATGGGCAGAAAGCAATGGTGTAAGGACACAGCTAAAAATTGCTTATGTCCAAGGTGCAGGACGTGGTGCAATAGCGAGGGAGGATCTCAAAGTTGGAGACATTGCTTTAGAAATTCCTAGTTCCATTATCATTTCCGAGGAGCTTGTTTGTGAAACTGATATGTATCATGTCTTAAAAGAGGTTGATGGCATATCTTCAGAAACAATATTGCTGCTGTGGAGTATGAAAGAGAAGTACAACGTCAATTCAAAATTCAAAATATACTTTGACACACTCCCGGAAAAATTCAATACAGGATTGAGTTTTGGCATTGAAGCAATTACAATGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCAAGACAGCACCTGCATGCTCAGTATGACGAGTTGTTCCCTGCTTTGTGTAACAACTTCCCTGAGATATTTCCAGTAGAGCTGTATACATGGGAGAAATTTTTATGGGCTTGTGAACTTTTTTACTCCAATAGCATGAAGATAATGTTCCCTGATGGAAAGCTGACGACATGCTTGATCCCTATAGCTGGCTTTCTTAATCATTCACTGTGCCCACATATTTTGCACTATGGCAAAGTAGATGCTACTACAAATTCATTGAAATTTCGGCTATCAAGACCATGCAAATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTTCTCCAGTTCTCATCTAATTACCTTCTATGGTTTCTTACCGCGAGGAGACAACCCATATGATACCATTCCATTAGATATTGATGGTTCTGATGTTGATTATGTTGAGGATAAATGCCCGCCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCCAACAATCACAGCCTATTCTATTATGGCCTTCCCTCTCCATTATTGGACCATCTTCGGAGATCTCGAAGTCCCATGCTGAATACGAAGACCTTGTTGCAAGAAAACTTGGAAAATGAGCTGCAAATTCTTGAAGATCTAATATATATATTTGATGACATGATTGACAACATGGGTGAGACCGATTTTGATGACAGAGAAAACTGCAGCTGGGATGGAAAATTGGCAATGGATTTTAAGAATCTACAAAGACGAATTGCGTGTTCTGTTTCAAGCTCATGTCATAATGGTGTCAACATGTTGACGAATGAATTAAACAAGTGCATGGCTGAGGACACACGAGGCTAA 1791 0.4054 AHHPAKLTDLNTFPFLPHSLTQSLTNICRSNSRASLAASALLPSAVVMDTGEEYSLVIELSENDLFFEQKKKLLENKGFRPKERIYLKDTSKPGWVNATVKVLLQIARIIQLNELELYFAEDDGCPLVEFYSPRNELEAFDSILSLVDISLSSCTNLHTNILELLRQTILDLISDFGDKNSVKGIVERDHGIDQEERLIKWAESNGVRTQLKIAYVQGAGRGAIAREDLKVGDIALEIPSSIIISEELVCETDMYHVLKEVDGISSETILLLWSMKEKYNVNSKFKIYFDTLPEKFNTGLSFGIEAITMLDGTLLLEEIMQARQHLHAQYDELFPALCNNFPEIFPVELYTWEKFLWACELFYSNSMKIMFPDGKLTTCLIPIAGFLNHSLCPHILHYGKVDATTNSLKFRLSRPCKSGEECCLSYGNFSSSHLITFYGFLPRGDNPYDTIPLDIDGSDVDYVEDKCPPNWTTHMVRGTWLSNNHSLFYYGLPSPLLDHLRRSRSPMLNTKTLLQENLENELQILEDLIYIFDDMIDNMGETDFDDRENCSWDGKLAMDFKNLQRRIACSVSSSCHNGVNMLTNELNKCMAEDTRG* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2839 596 Gene3D - 50 173 IPR036464 -
Amo01g2839 596 PANTHER BNAA07G01600D PROTEIN 52 592 - -
Amo01g2839 596 SUPERFAMILY SET domain 194 448 IPR046341 -
Amo01g2839 596 CDD SET_LSMT 211 441 - -
Amo01g2839 596 Pfam SET domain 220 427 IPR001214 GO:0005515
Amo01g2839 596 Gene3D set domain protein methyltransferase, domain 1 193 441 - -
Amo01g2839 596 ProSiteProfiles SET domain profile. 209 427 IPR001214 GO:0005515
Amo01g2839 596 Coils Coil 508 528 - -
Amo01g2839 596 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 52 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2839 Amo-Chr1 99383632 99389631 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Amo01g2839 SET 3.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2839 K19199 - gmx:100778605 889.412