Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2829 ATGAGCTATATAATAAACGCACACAGCACTATTATCACTATCCCAAACCAACACAAACAAATTAAACCATCGAAAATGGAATCTGCTACAGCCGCTCCCACTCAACAAGAATTCATCTTCCGATCCAAGCTTCCTGACATTCCCATCCCCACCCACCTTCCTCTCCATTCTTACTGCTTTCAGAATCTTCCACTCTTCCATGACCGCCCGTGCCTCATCGACGCCGAAACCGCCACCACGCTAACCTATGCCGACGTCCACCTCGCCACCCGCCGCATCTCCGCCGGTCTCCACTCCATCGGCATCCGCAAGGGTGACGTCATCATGCTCGTCCTCCGCAACTGCCCCGAATTCGCCCTCGCTTTCCTTGGCGCCTCCCGCTGCGGCGCCCCRGTCACGACCGCCAACCCCTTCTACACTCCCGCCGAGCTGGCCAAGCAAGCCACCGCCACCAAAACTAAGCTCATCATAACGCAATCCGCMTACGTKGAGAAATTCAAAGAGTACCTGGAAACSAACAACAACGACGTCAAGATCATGTGCATTGATGGTTCCCCTGAAGAATCACAGGACACTAGTGTTCTGCACTTTTCCCTTCTCACAAATTCCAATGAAAACGACGAGCCTGAAGTTAACATCACCKCCGACGATCTCGTGGCGATCCCGTTCTCCTCCGGGACATCGGGGCTGCCAAAGGGGGTGATGTTAACGCACAGCAACCTGGTSACCACGGTGGCGCAACTTGTTGACGGCGAGAATCCTCATCAGTACACGCACAGCGAGGACGTTCTCCTCTGCGTGCTGCCAATGTTTCACATATACGCACTGAACTCGATCTTGTTATGTGGCATTCGAGCGGGTGCGGCGGTTCTGATCGTGCAGAAGTTTGAGATAACGACTCTGATGGAGTTGATAGAGAAGTACAGGGTGACGGTGGCGTCTCTGGTGCCGCCGATAGTGTTGGCGGTGGTGAAGAGTGGGGATACTCACAGGTATGATCTGTCTTCGATTCGTGGGGTGATATCAGGTGCCGCTCCCATGGGAATGGAGCTTCAGGAAGCTGTGAAGGCTAGGCTTCCCCATGCCACTCTCGGACAGGGCTATGGGATGACAGAAGCGGGGCCACTTGCCATAAGCTTAGCATTTGCAAAGGAACCATTCAACGTTAAATCAGGTGCATGCGGCTCCGTCGTTAGAAACGCTGAGATGAAAATCGTCGACACTGACACTGGTACTTCCCTTCCACCTAACAAACCCGGTGAAATTTGCATTCGAGGCACTAAAGTCATGAAAGGGTACCTGAATGACCGAGAGGCGACGGAGAGAACCATAGACAAAGAAGGATGGTTACACACGGGTGACATTGGTTACATTGATGATGATGATGAGCTCTTCATCGTTGATCGCTTGAAGGAGCTTATCAAATACAAAGGATACCAAGTGGCACCTGCTGAGCTGGAATCTTTGTTGATTGCCCACCCAAACATCTCTGATGCCGCTGTTGTACCGCTGAAAGATGAAGTTGCTGGAGAAGTACCAGTTGCATTTGTTGTGAGATCAAATGGTTCTAATATCACCGAGGATGAAATCAAGAAATATATTTCTAAACAGGTGGTATTTTACAAGAGAATAAACAGAGTGTTCTTCACTGAAAGTATTCCAAAAGCAGCGTCAGGTAAAATTCTGAGGAAGGTATTAACAGCAAGGCTTAACGAAGGTTTGGTGACCAATTAG 1734 0.5017 MSYIINAHSTIITIPNQHKQIKPSKMESATAAPTQQEFIFRSKLPDIPIPTHLPLHSYCFQNLPLFHDRPCLIDAETATTLTYADVHLATRRISAGLHSIGIRKGDVIMLVLRNCPEFALAFLGASRCGAPVTTANPFYTPAELAKQATATKTKLIITQSAYVEKFKEYLETNNNDVKIMCIDGSPEESQDTSVLHFSLLTNSNENDEPEVNITXDDLVAIPFSSGTSGLPKGVMLTHSNLVTTVAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLMELIEKYRVTVASLVPPIVLAVVKSGDTHRYDLSSIRGVISGAAPMGMELQEAVKARLPHATLGQGYGMTEAGPLAISLAFAKEPFNVKSGACGSVVRNAEMKIVDTDTGTSLPPNKPGEICIRGTKVMKGYLNDREATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGYQVAPAELESLLIAHPNISDAAVVPLKDEVAGEVPVAFVVRSNGSNITEDEIKKYISKQVVFYKRINRVFFTESIPKAASGKILRKVLTARLNEGLVTN* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2829 577 Pfam AMP-binding enzyme 67 476 IPR000873 -
Amo01g2829 577 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 34 570 - -
Amo01g2829 577 Gene3D - 471 574 IPR045851 -
Amo01g2829 577 Pfam AMP-binding enzyme C-terminal domain 485 560 IPR025110 -
Amo01g2829 577 SUPERFAMILY Acetyl-CoA synthetase-like 34 572 - -
Amo01g2829 577 Gene3D - 30 470 IPR042099 -
Amo01g2829 577 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 34 570 - -
Amo01g2829 577 CDD 4CL 49 566 - -
Amo01g2829 577 ProSitePatterns Putative AMP-binding domain signature. 221 232 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2829 Amo-Chr1 99302516 99307255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2829 37 538 Monolignol Biosynthesis Gene Families AT1G51680 65.020 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2829 K01904 - gmx:548034 886.715