Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2774 ATGAATGCACTTCTTGAAGGATTATTTGATGGCGTCGAAAAAGTGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGAGTTGAATGAGGTTGCACTTATTCCGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCATGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGGTATGGAAGAATGCTCAACCATTCATTGATTGGCTTCGGAATGCTGAATCAGAATCGGAGGAAGAATGA 354 0.4407 MNALLEGLFDGVEKVFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFCYKKGSNELNEVALIPKALYDVDLVEEEHVMHWYSKGLKGDKKDSQVWKNAQPFIDWLRNAESESEEE* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2774 117 Gene3D - 1 117 - -
Amo01g2774 117 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 117 - -
Amo01g2774 117 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 117 IPR045196 GO:0003743|GO:0006413
Amo01g2774 117 Pfam eIF4-gamma/eIF5/eIF2-epsilon 39 117 IPR003307 GO:0005515
Amo01g2774 117 SMART 542_3 25 113 IPR003307 GO:0005515
Amo01g2774 117 ProSiteProfiles W2 domain profile. 1 117 IPR003307 GO:0005515
Amo01g2774 117 CDD W2_eIF5 3 115 - -
Amo01g2774 117 SUPERFAMILY ARM repeat 4 111 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2774 Amo-Chr1 98519937 98521020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2774 1 110 Eukaryotic Initiation Factors Gene Family AT1G77840 55.856 4.77e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2774 K03262 - aip:107619007 228.024