Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2734 ATGGAGGAAATATCTTCTAGTGTTGCAGTGCCATTTACAATTGGGAACTTGATTCAGAAGGAGTCAGCAGTGGCAACCCACGTGGAGATAACTGGTATAAAGCTTATGGCAAATACTGCTGCAGCTTTAATATTAAATCCTTCAGTGGAAGGTTGCCAACCATATTCTGTTGGAAGTGATAATCATTCTGATGTTAGTCTCAAACATCAAATTACGGTATCTGCAGAGATGAAGGAGAATGAAGTTGGAGCTGCCGTTGTCTCAGAAATGGTTATTGAATGTGACAGTAATTGGGTCTTGAGAGAAAGCCATAACCCACCAAGGAAGGAAGATGAATTCATGCTGGCTGTGGATTTTCATTGTCTACATAGTTCAAGCTCCAATGACAAATGCAGCCCCTCTGGGGAGGAAGCTGCATCCTTGAAGGCCATTTATTCTGAGATAGATTCGCCAGTTATCATAGGGGTTGATGATAAAATCTATGCTGAGTATGGATTAAACAAGACACATCCAGCACTGCAGCCAGAGGAGAACACAGTTTCTGTTGCAATGGATCTTGAGAGTGAGGATCCAAGGGGATTGGATGGGTCTGATCCAAAGTTTTGTGCTGCACCTCTTGATCAGTCTAACAGAACAAGCAACCCGAATGCTTCGGAAGTGAGTAGTCGTGTTCTCTGTGGTTTTTCATCAATCTGTGGAAAAAGACCAGAGATGGAAGATGCTATAGCTGTTAAGCCTAAACTTCTTCAAGTTCCTTCAAAGATGCTAACAGATAGCCATGTGAACGATAACACAATATGCTCATTAGCCCACTTTTTCGGTGTCTATGATGGACATGGAGGCTTTCAGGTTGCCAATTACTGCCGGGAACGCCTGCATTCGGCTTTGATTGAGGAGATAGAAGCTGCACAATCAAGTTTGGCAGAAACAGAACTAGGAGATTTTTTACAGGACTATTGGAAGAAAGCATTTGTAAGTTGTTTTCAGAAAGTAGATGATGAAGTTGGAGGAATTCGAGCTGGTAATGGCGGAAATAACATTGGTGGACTAGAGTCTACGATTGAACCAATTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATATTGAGTCAATCACACATAATAGTCGCAAATTGTGGGGATTCAAGAGCCGTCTTGTATCGTGGAAAAGAAGCCATTCCATTGTCTGCTGACCACAAACCAAACAGGGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATACATTGGCAAGGGTACCGAGTTCTTGGCGTTTTGGCAATGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGTATTATTCCAGAACCGGAAGTGAAGTTTGTGCAACGGGAGAAACATGACGAGTGCCTTATTCTAGCTAGTGATGGTTTATGGGATGTGGTGACAAATGAAGAAGCCTGTGAAGTTGCACGGAAGAGGATCCTTCTTTGGCACAAGAAGTATGGTGAGAATGCGTCAATGACCGAACAAGTTGAAGAAGGAGTTGACCCTGCAGCTCACTCTGCTGCAGAGTATCTCTCTAGACTTGCCCTCCAAAGGGGAAGCAAAGATAACATATCTGTAATTGTGATAGACTTGAAGGCTCAAAGAAAAATTAAGAGAAAAGCATAA 1653 0.4338 MEEISSSVAVPFTIGNLIQKESAVATHVEITGIKLMANTAAALILNPSVEGCQPYSVGSDNHSDVSLKHQITVSAEMKENEVGAAVVSEMVIECDSNWVLRESHNPPRKEDEFMLAVDFHCLHSSSSNDKCSPSGEEAASLKAIYSEIDSPVIIGVDDKIYAEYGLNKTHPALQPEENTVSVAMDLESEDPRGLDGSDPKFCAAPLDQSNRTSNPNASEVSSRVLCGFSSICGKRPEMEDAIAVKPKLLQVPSKMLTDSHVNDNTICSLAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAAQSSLAETELGDFLQDYWKKAFVSCFQKVDDEVGGIRAGNGGNNIGGLESTIEPIAPETAGSTAVVAILSQSHIIVANCGDSRAVLYRGKEAIPLSADHKPNREDEWARIEAAGGRVIHWQGYRVLGVLAMSRSIGDRYLKPCIIPEPEVKFVQREKHDECLILASDGLWDVVTNEEACEVARKRILLWHKKYGENASMTEQVEEGVDPAAHSAAEYLSRLALQRGSKDNISVIVIDLKAQRKIKRKA* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2734 550 Pfam Protein phosphatase 2C 237 533 IPR001932 -
Amo01g2734 550 PANTHER ALPHABET, ISOFORM E-RELATED 119 549 - -
Amo01g2734 550 SUPERFAMILY PP2C-like 218 541 IPR036457 -
Amo01g2734 550 SMART PP2C_4 215 538 IPR001932 -
Amo01g2734 550 Gene3D - 215 550 IPR036457 -
Amo01g2734 550 ProSitePatterns PPM-type phosphatase domain signature. 272 280 IPR000222 GO:0043169
Amo01g2734 550 ProSiteProfiles PPM-type phosphatase domain profile. 225 540 IPR001932 -
Amo01g2734 550 CDD PP2Cc 226 540 IPR001932 -
Amo01g2734 550 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 119 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2734 Amo-Chr1 98092955 98096427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2734 210 549 PP2C-type Phosphatase Gene Family AT4G26080 60.174 2.68e-135 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2734 K14497 - gmx:100802159 708.368