Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2733 ATGATGAAAAGTCAACAAACAGTCTCCATCTTCAAAGCTGCTTCTTTTCCATCTCCCACCCCAGTTGCTCGTCAATGGACTGAAAGTGGAACCTTTAAAGATGGGGATCTGCTTGTCAACAGGGATGGAGTTAGAATTGTTTCTCAGAGTGAAGTGGAGCCTCCACCTCCAAACCCGATCATGCCGATAGACAACCAGCTAAGTTTGGCAGATATAGACACAATCAAAGTGGTTGGAAAAGGAACTGGAGGGGTTGTGCAGTTGGTGCAACATAAATGGACTAATCAGTTTTTTGCATTAAAGGAAATTCAAATGAATATCGAGGAGTCTATGCGAAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATTCTATGCCAATGGTGTTATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGCGGATCTTCTGAAGAAAGTCAAAACAATTCCAGAGGCTAATCTTGCAGCCATCTGTAAACAGGTGCTAAAGGGATTAATGTATCTTCACCATGAAAAACATATCATCCACAGAGACTTGAAACCTTCTAATTTGTTGATAAATCATAGAGGTGAAGTAAAGATTACTGATTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATCGGCACATTCAACTATATGTCTCCGGAGAGGATCAACGGTAGCCAGCGTGGCTATAACTACAAAAGTGATATATGGAGCTTGGGATTAATATTGCTCGAGTGTGCTATGGGGAGGTTTCCATACACACCACCAGATCAAAGTGAGAGATGGGATAGTATTTTCGAACTAATTGAAACCATTGTAGATAAACCTCCTCCTACTGCTCCATCAGAACACTTTTCTGCAGAATTTTGCTCATTTATATCAGCATGCTTACAGAAAGACCCGAAGGATAGACTAACAGCTCAGGAACTTATGGGACATCCTTTTGTCAGCATGTACGATGACTTGCATATAGATCTTGGAGCATACTTCTCCAACGCAGGGTCTCCACTCGCAACCTTATAA 1077 0.4113 MMKSQQTVSIFKAASFPSPTPVARQWTESGTFKDGDLLVNRDGVRIVSQSEVEPPPPNPIMPIDNQLSLADIDTIKVVGKGTGGVVQLVQHKWTNQFFALKEIQMNIEESMRKQIAQELKINQSAQCPYVVVCYQSFYANGVISIILEYMDGGSLADLLKKVKTIPEANLAAICKQVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTFNYMSPERINGSQRGYNYKSDIWSLGLILLECAMGRFPYTPPDQSERWDSIFELIETIVDKPPPTAPSEHFSAEFCSFISACLQKDPKDRLTAQELMGHPFVSMYDDLHIDLGAYFSNAGSPLATL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2733 358 Gene3D Transferase(Phosphotransferase) domain 1 152 353 - -
Amo01g2733 358 SUPERFAMILY Protein kinase-like (PK-like) 69 340 IPR011009 -
Amo01g2733 358 Pfam Protein kinase domain 74 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2733 358 ProSiteProfiles Protein kinase domain profile. 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2733 358 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Amo01g2733 358 CDD PKc_MAPKK_plant_like 87 338 - -
Amo01g2733 358 PANTHER MAP KINASE KINASE 23 358 - -
Amo01g2733 358 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 23 358 - -
Amo01g2733 358 Gene3D Phosphorylase Kinase; domain 1 61 151 - -
Amo01g2733 358 SMART serkin_6 72 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2733 358 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2733 Amo-Chr1 98088885 98092157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2733 27 357 MAP Kinase Kinase Gene Family AT4G26070 66.766 4.99e-167 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Amo01g2733 Pkinase 1.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2733 K20603 - gmx:100789734 586.645