Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2699 AGAAACGCATGCTCCTTCACCACCATCCTCCTTATCTGTTTGAACTTGTCACTGTTTGTAATCTCCGCAGCCTCTTTTGCTCCCACAATCCTCCTCAAGATGCCCCCAACCTCCTTCGGCATGGCGTTCTTCATGGTCTCCGGCATCTCAATTCTCTCATCCCTTGTGGGGTTCTACTCCCAGCTCACATACTTATGCTTCCTCACCCACATTTCCCTTGTATTAGCCTCATTGGTAGGTCAAATTCTCACCATATTAGCCTTGTTTACAAGAGAGAAAGCAAGCCTGTCTCTGCTTAAGTCGCCTCGAGACCCGAAAGAAGCTAAGTTCTTGGTGAGGATGGAATGCGGGGCTTTGATGGCAATGTGCATGTTGCAGGTGGTTGTGTTGGTCCTGAGTTGTGCAGTGCATAGTTGTTGGGTCAAAGACTATGAGGAGCTGGAAGCAGAGAAGGAAGCCATGGCTAGGAAGAGAAGCAGAAAGATGGCAAAAGTGCAAGAGGAATCCATGGCTAATGGAACCAAAATTGCACAGTGCAAAACCAAGGAGTTGGATGAGAACATGAAAAGCAAAAATGAGCAGGCTATGGATTCCAATTTTAATCCAACGATGAGCAGCAAGAAGAAGAAGGAACTTTCGGTTCAGCTTCCGAGTTCAGCGCCGCCAATCCCAAAGTTCGAAACTTTGAGGTTCTGTGATCTTCACTTTGACCGATTACAGCCATCGGATCAAGAATTGGATCAACATAGTAGGTTCGAATTTGGCCAATTCGTTGCACGACAAGCCCTCCTTGATGAAGAGTATTGGACAGCAGCATGGCTGAGGGCAGAAAGTCATTGGGAGAATCGAGCATATGAACGATATACTGATCATTATAAAAGGAACTTTGCAGATCAGGAATTTAATGCAATAAAACGGCGGTGCAAGGTGCAAAACGGGGAGAGTTGCACTTGCATTATCACGGTGAGGAAAGAGCAAAAGAATGTAAAACGCTCAATAATAAAAAGTGTTGTTGGGACCCTTGATTTGAATATCCGGTACTTGCTGCAAGGAGAGACTTTTCCTGGGGAACGAGCGAAGGCTCCTCCATTCTGCAGCATCAACAAAACACCATCAAGCAGATATGGCTACATTTCAAACTTGTGTGTTGCCAAATCAGCACGACGCCAGGGAATTGCAAGGAACATGCTCCATTTTGCTGTTGAATCTGCAAAATCCGTAGGTGTAACGCGTATATTTGCACATGTGGATAGAAATAATGGAGCTGCACAATCATTGTACAAGAACATGGGCTTTGAGATGGTTGAAATGGCAAACTCACTGTTGTTAGATGAGCAAACATACTTGCTCCGTTTACAGACGTAA 1365 0.452 RNACSFTTILLICLNLSLFVISAASFAPTILLKMPPTSFGMAFFMVSGISILSSLVGFYSQLTYLCFLTHISLVLASLVGQILTILALFTREKASLSLLKSPRDPKEAKFLVRMECGALMAMCMLQVVVLVLSCAVHSCWVKDYEELEAEKEAMARKRSRKMAKVQEESMANGTKIAQCKTKELDENMKSKNEQAMDSNFNPTMSSKKKKELSVQLPSSAPPIPKFETLRFCDLHFDRLQPSDQELDQHSRFEFGQFVARQALLDEEYWTAAWLRAESHWENRAYERYTDHYKRNFADQEFNAIKRRCKVQNGESCTCIITVRKEQKNVKRSIIKSVVGTLDLNIRYLLQGETFPGERAKAPPFCSINKTPSSRYGYISNLCVAKSARRQGIARNMLHFAVESAKSVGVTRIFAHVDRNNGAAQSLYKNMGFEMVEMANSLLLDEQTYLLRLQT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2699 454 Pfam Acetyltransferase (GNAT) family 287 432 IPR000182 GO:0016407
Amo01g2699 454 Coils Coil 144 164 - -
Amo01g2699 454 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 372 437 IPR016181 -
Amo01g2699 454 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 154 454 - -
Amo01g2699 454 Gene3D - 258 443 - -
Amo01g2699 454 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 154 454 - -
Amo01g2699 454 CDD NAT_SF 364 415 - -
Amo01g2699 454 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 364 454 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2699 Amo-Chr1 97844785 97849581 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo01g2699 Acetyltransf_1 3.9e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2699 - - adu:107457848 523.087