Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2680 ATGGGAAGAGAAGCACCAAAGCAGCAGCAGCAGCCGCCGGTTGCATACACAGTAGAGCAGCTTGTTGCCGTAAATCGATATAATCCCGATATTCTTGCCGATCTCGAAAACTATGTCAACGAACAGGTCTCGTCGCAAACCTACAGCCTCGACGCAAATCTCTGCCTTCTTCGCCTCTACCAGTTTGAACCGGATAAAATGAGTTCTCAGATTGTAGCCCGCATTTTGGTTAAGGCCCTTATGGCAATGCCAGCTCCAGATTTCAGCCTGTGTCTCTTTTTGATTCCTGAGCGGGTGCAAATGGAGGAGCAGTTTAAGACACTGATTGTTCTGTCACACTATTTGGAGACAGGAAGGTTTCGTCAGTTCTGGGATGAAGCAGCAAAAAATCGTCATATAGTTGATGCCGTTCCAGGATTTGAGCAGGCAGTCCAAGGCTATGCTATTCATGTCCTTTCCTTGACTTACCAAAAGGTTCCTAGAACTGTGCTTGCTGAGGCAATCAACATAGAAGGTTTATCCTTGGACAAATTCCTCGAGCACCAAGTAGCCAACTATGGTTGGGTCATAGAGAAGAGCCAAGGCAAGGGTCAGCTCATTGTCCTTCCCAAAAATGAATTTAATGACCCAGTTTTGAAGAAAAATTCCTCAGATAGTGTACCATTGGAGCATATTACTCGCATCTTTCCCATTCTTAGTTGA 702 0.4544 MGREAPKQQQQPPVAYTVEQLVAVNRYNPDILADLENYVNEQVSSQTYSLDANLCLLRLYQFEPDKMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKNRHIVDAVPGFEQAVQGYAIHVLSLTYQKVPRTVLAEAINIEGLSLDKFLEHQVANYGWVIEKSQGKGQLIVLPKNEFNDPVLKKNSSDSVPLEHITRIFPILS* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2680 233 Gene3D - 129 232 IPR036388 -
Amo01g2680 233 Gene3D ARM repeat; domain 1 11 126 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Amo01g2680 233 SUPERFAMILY "Winged helix" DNA-binding domain 138 230 IPR036390 -
Amo01g2680 233 Pfam CSN8/PSMD8/EIF3K family 68 195 IPR033464 -
Amo01g2680 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 4 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Amo01g2680 233 SUPERFAMILY ARM repeat 15 136 IPR016024 -
Amo01g2680 233 ProSiteProfiles PCI domain profile. 48 207 IPR000717 -
Amo01g2680 233 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT K 4 232 - -
Amo01g2680 233 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 5 233 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2680 1 233 Eukaryotic Initiation Factors Gene Family AT4G33250 73.820 7.00e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2680 K15028 - gmx:100306445 410.609