Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2657 ATGGCTGAGACCACACCCAATCACACACAAACAGTTTCTGGATGGGCTGCTCATGATTCTTCTGGCAACATAACCCCCTACACTTTCAAAAGAAGAGACAACGGTGTTAATGACGTGAGCATAGAAATCTTGTACTGCGGGATTTGCCACACGGACATTCACTACGTTAAAAATGAATGGGGAATCACTAGGTACCCGGTTGTTCCGGGGCACGAGATCGTTGGGGTGGTAAGCAAGGTGGGGAGGGAAGTGAAGGGATTCAAAGAAGGAGACAGAGTAGGAGTGGGGTGTTTGGCAGCAACATGCTTGGAATGTGAGTATTGCAAGACCGATCAGGAGAACTACTGCGAGAAACTTGAGTTCACTTACAATGGAGTTTTCTGGGATGGTAGCATCACTTATGGTGGCTACTCAAAAATGCTGGTCGCTGATTACAGATACGTGGTACATGTGCCGGAGAATCTGCCAATGGACGCAACGGCACCACTGCTGTGTGCTGGAGTGACGGTGTTCAGTCCCTTGAAAGACCACGGTTTGGTTGAATCGCGAGGGAAAAGCATTGGCATTGTGGGCTTGGGTGGTCTTGGACACGTGGCTGTCAAGTTTGCCAAGGCCTTTGGACACCATGTCACTGTCATAAGCACTTCTCCTTCCAAAGAGGTGGAGGCTAAGGAGCGTTTGGGAGCCGACCATTTCATAGTGAGTTCCAACCCCAAGCAAATGCAGGGTGCCAAGAGAAGCCTTGATTTCATTTTGGACACTGTTTCAGCTGAGCACTCTCTTTTGCCCCTTTTGGAATTGCTCAAAGTTAATGGCACTTTGTTTATTGTGGGTGCACCCGATAAGCCATTCCAATTGCCCGCATTTCCATTGATCTTTGGGAAGAGATCAATCAAAGGTGGGATCATAGGAGGAATAAAAGAAACCCAGGAAATGTTGGACGTTTGTGGGAAGCACAACATCACATGTGACATTGAATTAATCACTCCAGACAGAATCAACGAAGCTCTTCAACGTCTTGCTAACAATGATGTCCGCTACCGTTTCGTCATTGACATCGGTGCTGCCACCTCTAATAACTAA 1083 0.4755 MAETTPNHTQTVSGWAAHDSSGNITPYTFKRRDNGVNDVSIEILYCGICHTDIHYVKNEWGITRYPVVPGHEIVGVVSKVGREVKGFKEGDRVGVGCLAATCLECEYCKTDQENYCEKLEFTYNGVFWDGSITYGGYSKMLVADYRYVVHVPENLPMDATAPLLCAGVTVFSPLKDHGLVESRGKSIGIVGLGGLGHVAVKFAKAFGHHVTVISTSPSKEVEAKERLGADHFIVSSNPKQMQGAKRSLDFILDTVSAEHSLLPLLELLKVNGTLFIVGAPDKPFQLPAFPLIFGKRSIKGGIIGGIKETQEMLDVCGKHNITCDIELITPDRINEALQRLANNDVRYRFVIDIGAATSNN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2657 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 356 - -
Amo01g2657 360 Gene3D - 15 353 - -
Amo01g2657 360 Gene3D - 166 323 - -
Amo01g2657 360 SMART PKS_ER_names_mod 19 351 IPR020843 GO:0016491
Amo01g2657 360 PANTHER ALDEHYDE REDUCTASE 1 356 - -
Amo01g2657 360 SUPERFAMILY GroES-like 18 181 IPR011032 -
Amo01g2657 360 CDD CAD1 14 352 - -
Amo01g2657 360 Pfam Alcohol dehydrogenase GroES-like domain 37 150 IPR013154 -
Amo01g2657 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Amo01g2657 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Amo01g2657 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2657 Amo-Chr1 97309922 97311622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2657 14 354 Monolignol Biosynthesis Gene Families AT2G21730 57.018 1.32e-143 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2657 K00083 - gmx:100820588 610.142