Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2634 ATGGAATTCCAAAGTAGAGAGCAGGGGGATAATGGTAAACTTCTTAAAGCCCAAAGTCACATATGGAATCATACTCTTAATTTTATAAACTCTATGTCTCTTAAATGTGTTGTTGAGTTAGGCATACCTGATGCTATTCACAAATATGGCAAACCTATGCCACTTTCACAACTCATTTWTTCATTGCAAATTCATCCATCAAAAACCTCCTTTGTCCATCGATTGATGAGAATCTTGGTCCATTCCAACTTCTTCACTACCAAGAATGTCACCAACAATGACCTCGAAGTTGAAGTTGGGTATGTTCTAACCGATTCATCTATGCTATTGCTTAAGGACAACCCCTTAAGTTTGATACCTCACTTGTTTATGATCCTTGATCCCAATTTTATAAAACCATGGCATCAGATGTCCACATGGTTTAAAAATGATGATCCTACATCATTTGAAACGGAATATGGGATAACGTTTTGGGATTATGCTAGGCAAGCTCCTAAATTTAATGAACTTTTCAACGATGCCATGGCAAGTGATGCACGATTGGTTAGCAAGTTTTTACTTGATGACAAGTGTAAGGGAGTGTTTGAAGGTTTGGAATCATTGGTTGATGTTGGTGGAGGCACCGGAACTGTTGCAAAGGCCATTGGCAAAGCATTCCCACAGTTAGAGTGCATTGTTTTGGATCTTCCACATGTTGTTGCTGATTTGGAAGGAAGTGAGAACCTTAAATATGTTGGAGGAAACATGTTTGAGGCCATTCCTCCTTCTAATGCCATTTTATTGAAGTGGATTTTGCATGACTGGAATGACGAGGAATGTTCGAAAATACTGAGGAACTGCAAAGAGGCACTACACATGAGCAAAGGCAAAGGAAGGAAGGTTATTGTTATAGACATCGTGATGGGGAATGAGAAGAGTGATCATGAGTCAATTGAAACACAACTCTTCTTTGACATGTTGATGATGGTGTTCCTAACAGGAAAGCAGAGAAATAAAGAAGAATGGGCCAACTTAATATTCTCAGCTGGTTTTAGCGACTACAAAATAATTCCAATTCTTGGAATAAGGTCCCTTATTGAGATATATCCATAA 1092 0.3846 MEFQSREQGDNGKLLKAQSHIWNHTLNFINSMSLKCVVELGIPDAIHKYGKPMPLSQLIXSLQIHPSKTSFVHRLMRILVHSNFFTTKNVTNNDLEVEVGYVLTDSSMLLLKDNPLSLIPHLFMILDPNFIKPWHQMSTWFKNDDPTSFETEYGITFWDYARQAPKFNELFNDAMASDARLVSKFLLDDKCKGVFEGLESLVDVGGGTGTVAKAIGKAFPQLECIVLDLPHVVADLEGSENLKYVGGNMFEAIPPSNAILLKWILHDWNDEECSKILRNCKEALHMSKGKGRKVIVIDIVMGNEKSDHESIETQLFFDMLMMVFLTGKQRNKEEWANLIFSAGFSDYKIIPILGIRSLIEIYP* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2634 363 SUPERFAMILY "Winged helix" DNA-binding domain 13 115 IPR036390 -
Amo01g2634 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 361 IPR029063 -
Amo01g2634 363 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
Amo01g2634 363 PANTHER O-METHYLTRANSFERASE 12 363 - -
Amo01g2634 363 Pfam O-methyltransferase domain 134 345 IPR001077 GO:0008171
Amo01g2634 363 Gene3D Vaccinia Virus protein VP39 111 363 IPR029063 -
Amo01g2634 363 PANTHER O-METHYLTRANSFERASE 12 363 IPR016461 GO:0008168
Amo01g2634 363 Gene3D - 4 110 IPR036388 -
Amo01g2634 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Amo01g2634 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2634 Amo-Chr1 95369745 95372602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2634 32 350 Monolignol Biosynthesis Gene Families AT5G54160 31.677 1.37e-47 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2634 - K16040 aip:107609507 537.339