Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2595 ATGTCGCTCAAGCGGCGCCCCGAAGATGCTAAGCACAAATCTGACACTTCCACTCCCGACGATAAGCGGCCGAGGCATCCACCCTTTGCCAATGTGGTGTGCGAGTTGATGAGGATACAGTCAGTCAAGCATTTGCTGGAGCCGATTTTAGAGCCCTTGATTCGTCGAGTGGTTAAGGAGGAAGTAGAATTGGCCTTAAGGAAGCATTTAACCAGCCTGAAACAGACTGGTGGAAAGGAGATGCATACTTCTGAATTGAGAAGCTTGCAGCTGCAGTTTGAAAACAATATTTCTCTTCCAGTGTTTACTGGAGCTCGGATTGAAGGAGAGGATGGCTCCAACTTAAGAGTAGTATTAGTTGATGTGTCAACAGGGAAAGTTGTTAGTTCAGGACCTGAATCCTTAGCTAAGGTGGAAATTGTGGTCCTTGAGGGTGATTTTGAAGATGAAAGTGAAATTTGGATGCCTGAAGAGTTTAAGAGCAACATTGTGAGGGAGAGAGAAGGAAAAAAACCCCTCCTTACTGGAGATGTAGCTGTATATCTTAAAGATGGGACTGGTATGGTTGGTGAAATTTCATTTACAGATAACTCAAGCTGGACAAGGAGCCGTAGGTTTAGGCTTGGTGCAAAAGTTGTGGACAACTTTGATGGTGTTAGAATAAGAGAAGCAAAGACAGAGTCATTCATTGTTAGGGATCACCGAGGAGAATTGTACAAGAAGCACCACCCTCCTAATCTGTTTGATGAAGTTTGGAGACTGGAGAAGATAGGCAAGGATGGAGCTTTCCACAAACGTCTGAGTCGGGAAAAGATCTACAGCGTGAAAGATTTTCTTACACTTCTGAATCTGGATCCTGCAAAGCTACGCAGTATACTGGGCACTGGCATGTCTGCAAAGATGTGGGAAATAACTGTGGAGCATGCTCGAACTTGTACAATTGATACCACGAGGCATGTTTACTTCCCTCCCTCCTCTCAACAGAAAGCTGGTGTGGTCTTCAATGCTGTGGGACAAGTCACGGGACTACTCTCTGAGTGTGAGTATGTCCCGGTACATAAGCTGTCGGAAACTGAAAAGGCATTCTCCTCTGCTAACTTCTTTACTTCCTTTATTCTCTCCCCTTTCCTTTTTCGTTTCTTTATAATACTTACTTTAGATGCATTTCATTATCAGGCTGATGCTCAAGAATTGGTCATTTCTGCAATTAAACAAGGCGAAAAAATTTCCTCTTATGAAGATGAAGCATCTCTTTTGGAGGGTTCTTCACATCTAACTAATGTTCTTTACTCCGAGAGCTCACCAAATACCGAGGGATCCAGTGCCAACAAACTTTTGGCTCCTCAAAAGACTGAAGGTCCCACTTACACACCAGCAAGTGCCTCTTCTCCGGATATCATGTCATCCATTTATTCTGTTGGAGGCACCAGTGCCTTGGATGACTTCTGCTTGCCGAACTTTGACAGCATGGGCTTAAGATATGATCCTACTAGTCTTGGTTTTCCGGTCCACCAGGTTGCCAGCACTCTGATCTGCGACCCTGATCCAATGGCCCATGCATTTGGAGACGAAGATCATCTGCGTTTTTTCGATACCGATCAAGATTTGCAGAGCGCTGTGGATAGCTTCATGCTGACGCGCTCATCTGTTGCCATCGGTAAAGCTCAGAGGAGATGGAGAAAGGTAACCAACGTCCTAAAATGGTTCATGGTGAGGAAACGAAAAAGCGATGCTAATCAGCAGCGGCAGTTGCGAAGAACATGA 1764 0.4501 MSLKRRPEDAKHKSDTSTPDDKRPRHPPFANVVCELMRIQSVKHLLEPILEPLIRRVVKEEVELALRKHLTSLKQTGGKEMHTSELRSLQLQFENNISLPVFTGARIEGEDGSNLRVVLVDVSTGKVVSSGPESLAKVEIVVLEGDFEDESEIWMPEEFKSNIVREREGKKPLLTGDVAVYLKDGTGMVGEISFTDNSSWTRSRRFRLGAKVVDNFDGVRIREAKTESFIVRDHRGELYKKHHPPNLFDEVWRLEKIGKDGAFHKRLSREKIYSVKDFLTLLNLDPAKLRSILGTGMSAKMWEITVEHARTCTIDTTRHVYFPPSSQQKAGVVFNAVGQVTGLLSECEYVPVHKLSETEKAFSSANFFTSFILSPFLFRFFIILTLDAFHYQADAQELVISAIKQGEKISSYEDEASLLEGSSHLTNVLYSESSPNTEGSSANKLLAPQKTEGPTYTPASASSPDIMSSIYSVGGTSALDDFCLPNFDSMGLRYDPTSLGFPVHQVASTLICDPDPMAHAFGDEDHLRFFDTDQDLQSAVDSFMLTRSSVAIGKAQRRWRKVTNVLKWFMVRKRKSDANQQRQLRRT* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2595 587 Pfam Calmodulin binding protein-like N-terminal domain 89 234 IPR046831 -
Amo01g2595 587 MobiDBLite consensus disorder prediction 430 461 - -
Amo01g2595 587 PANTHER OS02G0177800 PROTEIN 1 361 IPR012416 GO:0005516
Amo01g2595 587 PANTHER OS02G0177800 PROTEIN 392 575 IPR012416 GO:0005516
Amo01g2595 587 PANTHER CALMODULIN-BINDING PROTEIN 60 A 1 361 - -
Amo01g2595 587 PANTHER CALMODULIN-BINDING PROTEIN 60 A 392 575 - -
Amo01g2595 587 Pfam Calmodulin binding protein C-terminal domain 319 361 IPR046829 -
Amo01g2595 587 MobiDBLite consensus disorder prediction 1 27 - -
Amo01g2595 587 Pfam Calmodulin binding protein central domain 247 312 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2595 Amo-Chr1 92540851 92545981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2595 1 384 Calmodulin-binding Proteins AT5G62570 60.417 1.14e-161 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2595 - - gmx:100793156 837.41