Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2573 ATGGGAGTGAGACGATGGTTTTGTTCATGGATTCCGTTTCTGGCGATGGTGATTGTGGAGTGCCTTGACGTTGGGTTGACCACACTTGGCAAAGCAGCCATGTCAAGAGGGATGAACCACTTTATTTTTGTTGTCTACTCAAATGCTCTTGCCACTTTGATCCTCCTCCCTTCTTCTTTCTTCATCAACAGGAACAGAACTACAACACCACCTCTTTCTTTCTCGCTTCTTTGCAAATTCTTCCTCCTTGCCCTTGTTGGCATAACTGTGATGCAGAATTGTGTTTTCACTGGCATAAGCTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATTACTTTTTTGCTGGCTGTCATATTCAGGATGGAGAAATTTGAAATTAGGAGCTCCATAAGCCAGATCAAGATGCTGGGAGCCGTGGTGTCCATATCAGGAGCATTACTCGTCACCCTTTACAAGGGAAGTCCGATTGCTGGCTTTCAAATTCAACCATTACAACAAATGCTTTCAGAGACTACCAATTGGGTCATTGGTGGCCTCTTTCTTGCCATTGCATCTACATCCCTTGCAATCTGGAATATTGCTCAGGCAGCAATTCTTAAAGGATACCCCTCTCAGTTGACCATTATAGCCTTCTACTGCCTGTTTGGAACCATCCAATGTGCAATACTTTCCTTGATCGTAGTCAGAGATCCAAATGCCTGGAAACTAAGGCCTGACATTGAGCTCACCACCATATTCTATTCAGCAATTTTCGGAAGTGTGGTCACTTTTTCTGTATTGACCTGGTGCATAAATAAAAAAGGACCAGTATTTGTGACCATGTTCAAGCCTTTGGGGATTGCAATTGCTGCATTCTCAAGTGTTGTCTTCCTTGGTGAAACACTTCCTGTTGGCAGGACTATTGGTTTGATGGTAATCATCATCGGATTTTACACAGTACTTTGGGCACAATCCAAAGAAGAAATTGGAGAAGGCATCGATGTAGATAGACAATCATCCCTGTCTGCACAAGCAAGTCCTCTACTAGAGTCACCATGA 1056 0.4375 MGVRRWFCSWIPFLAMVIVECLDVGLTTLGKAAMSRGMNHFIFVVYSNALATLILLPSSFFINRNRTTTPPLSFSLLCKFFLLALVGITVMQNCVFTGISYSSPTLGSAMSNLTPAITFLLAVIFRMEKFEIRSSISQIKMLGAVVSISGALLVTLYKGSPIAGFQIQPLQQMLSETTNWVIGGLFLAIASTSLAIWNIAQAAILKGYPSQLTIIAFYCLFGTIQCAILSLIVVRDPNAWKLRPDIELTTIFYSAIFGSVVTFSVLTWCINKKGPVFVTMFKPLGIAIAAFSSVVFLGETLPVGRTIGLMVIIIGFYTVLWAQSKEEIGEGIDVDRQSSLSAQASPLLESP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2573 351 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Amo01g2573 351 Pfam EamA-like transporter family 24 155 IPR000620 GO:0016020|GO:0016021
Amo01g2573 351 PANTHER WAT1-RELATED PROTEIN 9 346 IPR030184 GO:0016021|GO:0022857
Amo01g2573 351 PANTHER WAT1-RELATED PROTEIN 9 346 - -
Amo01g2573 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 324 - -
Amo01g2573 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2573 Amo-Chr1 90743181 90744844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2573 4 350 Nodulin-like Gene Family AT3G28050 44.628 2.27e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2573 - - ccaj:109809148 485.723