Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2538 ATGGTTCTAGAAAAGATTGTCCATCACATTGTTCAGGAGCTTCTAGGACCTCCTAACAGCAAGATGTGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAATTTTTCAACACCATTGGTGCTACTGCAAGTATCAGAAATCCCCGTGGTGTAGTTTTTGGTGTTCTTGGAAATACCAACCCTGGGGGATTCCCCATTGCCCGACCTGGCATTAGGGGATTGATGCCTGGGATGCCTGGGATGCCTGGGACAAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAGTTGA 294 0.4694 MVLEKIVHHIVQELLGPPNSKMCPAEENVEAICQFFNTIGATASIRNPRGVVFGVLGNTNPGGFPIARPGIRGLMPGMPGMPGTRKMPGMPGIDNDS* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2538 97 Gene3D - 1 50 - -
Amo01g2538 97 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 1 40 - -
Amo01g2538 97 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 40 96 IPR045208 GO:0003743
Amo01g2538 97 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 40 96 - -
Amo01g2538 97 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 1 40 IPR045208 GO:0003743
Amo01g2538 97 MobiDBLite consensus disorder prediction 75 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2538 Amo-Chr1 89236124 89236613 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2538 40 97 Eukaryotic Initiation Factors Gene Family AT5G57870 57.627 1.67e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2538 K03260 - qsu:112025127 80.8777