Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2515 ATGATTGTGAGTGTGAGAGGGATCATAGGTAGCGGCGATGGCGATGAAGAACTTGTACTGGTTGAAGGAAATGTCGAACAACGAGAGGGAGAAGAGGAATGGAGTGCTGATCTGTCACAGCTGTTCATAGGTTCGAAATTCGCTTCTGGAAGGCACAGCAGGATCTACAGAGGGATATACAAGCACATCGATGTTGCCATCAAGCTTGTGAGCCAGCCTGAGGAGGATGAGGAATTGGCTGCTCAGCTTGAGAACCACTTCACTTCTGAGTTTGTAGGAGCTTGCAAGAAGCCCCCTGTATTTTGCATAATCACAGAATACTTAGCTGGTGGCTCATTGAGAAGCTTCCTTCAAAGGCAAGGACCACATTCACTCCCTCTAGAACTTGTTCTAAAGCTAGCCTTAGACATTGCCAAGGGTATGCAATACCTTCACTCTCAGGGCATACTCCACAGGGATCTCAAATCAGAGAATCTTCTCTTGGGTGAAGACATGTGTGTTAAAGTAGCAGACTTTGGGATCTCATGCTTAGAATCCCAGATTGGTAGTGCTAAAGGGTTCACTGGAACTTACCGTTGGATGGCGCCAGAAATGATCAAGGAGAAGCACCATACCAAGAAAGTAGATGTTTACAGTTTCGCCATTGTTCTTTGGGAGCTTCTAACAGGACTAACACCCTTTGAGAATATGACACCAGAACAGGCAGCATTTGCAGTGACTCACAAGAATGCAAGGCCTCCATTACCATGTGATTGTCCATGGGCATTTAGTAATCTAATAAACAAATGCTGGTCAAGCAATCCGAAAAAACGACCACACTTTGATGAGATAGTCACTATTTTGGAGAGCTACATAGAATCACTGGAAAAAGATCCTGAATTTTTCACCAATTACAAACCACGTCGTCCACGTAATCTGGTTCTCAAATGCTTACCAAAGTGTAACTGTCGCCATGTATCCTCTTCTTCCAAATCTTAG 978 0.4438 MIVSVRGIIGSGDGDEELVLVEGNVEQREGEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHIDVAIKLVSQPEEDEELAAQLENHFTSEFVGACKKPPVFCIITEYLAGGSLRSFLQRQGPHSLPLELVLKLALDIAKGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFENMTPEQAAFAVTHKNARPPLPCDCPWAFSNLINKCWSSNPKKRPHFDEIVTILESYIESLEKDPEFFTNYKPRRPRNLVLKCLPKCNCRHVSSSSKS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2515 325 Pfam Protein tyrosine and serine/threonine kinase 44 281 IPR001245 GO:0004672|GO:0006468
Amo01g2515 325 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 23 303 - -
Amo01g2515 325 SMART serkin_6 41 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2515 325 CDD STKc_MAP3K-like 48 281 - -
Amo01g2515 325 Gene3D Phosphorylase Kinase; domain 1 29 109 - -
Amo01g2515 325 PRINTS Tyrosine kinase catalytic domain signature 105 118 IPR001245 GO:0004672|GO:0006468
Amo01g2515 325 PRINTS Tyrosine kinase catalytic domain signature 189 199 IPR001245 GO:0004672|GO:0006468
Amo01g2515 325 PRINTS Tyrosine kinase catalytic domain signature 252 274 IPR001245 GO:0004672|GO:0006468
Amo01g2515 325 PRINTS Tyrosine kinase catalytic domain signature 143 161 IPR001245 GO:0004672|GO:0006468
Amo01g2515 325 PRINTS Tyrosine kinase catalytic domain signature 208 230 IPR001245 GO:0004672|GO:0006468
Amo01g2515 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Amo01g2515 325 ProSiteProfiles Protein kinase domain profile. 41 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2515 325 SUPERFAMILY Protein kinase-like (PK-like) 31 281 IPR011009 -
Amo01g2515 325 PANTHER SERINE-THREONINE PROTEIN KINASE 23 303 - -
Amo01g2515 325 Gene3D Transferase(Phosphotransferase) domain 1 110 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2515 Amo-Chr1 87965459 87969906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2515 18 314 MAP Kinase Kinase Kinase AT1G62400 56.508 1.03e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo01g2515 PK_Tyr_Ser-Thr 1e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2515 - - ahf:112695517 605.52