Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2468 ATGTGGCTAAGTGGTGCAAAGGCTTCAGGAAAGGAATTGATTCCAGGGTCGTTGGCTCCCGAGGAGATAAAGGAAATGAAAGATGAGGAAGAGTTAGACATTCTTGCTGAAGAGGACCAGAGTAGATGTGCACTGTGTGGAGAGGGCTTTAATGAGTTTTACAACCACGAAATAGATGAGTGGACGTATAAAGGAGTCACATACCTTAAGGCATCTGTGGGAACAACATTGGCCACCATGGATAGACATAAACTAGGACCCATTGTTCATTCTAAATGCAGATTTGACTCTAACTCTACTATGTCCTCAACCAACATGTATTTACTTTTTATATACGATCTTAGTTACATTATATTAGCTTACTACTACTATTATTTACTCTTCTTTCTTGTTTCGTTTGTGTATGCAGGGAACCTACCAAGAGAGTAG 429 0.3986 MWLSGAKASGKELIPGSLAPEEIKEMKDEEELDILAEEDQSRCALCGEGFNEFYNHEIDEWTYKGVTYLKASVGTTLATMDRHKLGPIVHSKCRFDSNSTMSSTNMYLLFIYDLSYIILAYYYYYLLFFLVSFVYAGNLPRE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2468 142 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 1 99 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Amo01g2468 142 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2468 Amo-Chr1 83446327 83446755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2468 1 98 C2H2 Transcription Factor Family AT4G04885 53.061 7.15e-32 117