Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo01g2467 | ATGATGATGTTTCGTTCACTAGTGAACCACAGTGTGATCTCGGTAACTAATCCACCCACCAATCCACCCACCAGACTGGATTCCATTGGGACGGAGTTCGATCCAGATATCTTGAAGGTTCGTCATGAAGGTGTAATCAGTGCCTTATACGCTGATCTTCCTAGACGATGCACGAGCTATGGACTCCGATTCAAATGGCAAGATGAGCACAATAGACATATGGATTAG | 228 | 0.4561 | MMMFRSLVNHSVISVTNPPTNPPTRLDSIGTEFDPDILKVRHEGVISALYADLPRRCTSYGLRFKWQDEHNRHMD* | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo01g2467 | 75 | PANTHER | PRE-MRNA CLEAVAGE COMPLEX II | 3 | 75 | IPR045154 | GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379 | |
| Amo01g2467 | 75 | PANTHER | POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 | 3 | 75 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo01g2467 | Amo-Chr1 | 83445908 | 83446255 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo01g2467 | 3 | 75 | C2H2 Transcription Factor Family | AT4G04885 | 50.685 | 5.42e-20 | 80.1 |