Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2466 ATGGATAACGTTGGTGGTGATAGGTTAGACTCAATGGGAACTCAAAAGAGATTTTCTAGTAATGGTTGGAACATATTTCAAACATCCAAGACTTATAATCTCACTGATGAACAACAACATCAAAGTCCAAGAGCTCTTATTGAGGTATATGGTTGTGACAAAGGCTGTGAAATTCCTAGTACTAAGCTTTTGTTGGTGGAGCAGCCTGGCAGAAATGGTTTAGGGAGCAACTTTCCATTGGCATCATGGCAGGACACTGAAGAAGAGGAGTTTGATTGGAAAAATATGAATCCAAGATTAGTAGACTATAGTAGGAACAACAATTCTATGCAATCAAGTGTTAGATTCTTCAGGAAAAGGAAGTTATCTAATGATCTATCTAATTCTTCACAGTACCCCTTTAATATGGAGGCTGCTCCCCCTACTGTCAATGCTCATGCTACTCGTCCTTCCGACTTGAATCTAGCATTTCCATTGCAAAAGCGTCCAAGGAGTCTGTTTGAACAAATAAACGTTAATAATAACACCAATGTGGGTCATGGTCTAAATAGAACTTTGTTTATACATGACCAGTTGCCTAATCAACCTGGACCAATTTTCTCTAACCTGCAAAATCATGGACAAGCACCTCAACTACAGTTTCTTCCACCTCAAGTTCCATCTTCAACACAAATTAGTCATGAGAGCTCTTTGCAAGGAGATGGTGCCTCAATAAGTACGCCCATTTCAAATCCATTACCTGATATGCAAGGCTAA 756 0.3929 MDNVGGDRLDSMGTQKRFSSNGWNIFQTSKTYNLTDEQQHQSPRALIEVYGCDKGCEIPSTKLLLVEQPGRNGLGSNFPLASWQDTEEEEFDWKNMNPRLVDYSRNNNSMQSSVRFFRKRKLSNDLSNSSQYPFNMEAAPPTVNAHATRPSDLNLAFPLQKRPRSLFEQINVNNNTNVGHGLNRTLFIHDQLPNQPGPIFSNLQNHGQAPQLQFLPPQVPSSTQISHESSLQGDGASISTPISNPLPDMQG* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2466 251 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 33 187 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Amo01g2466 251 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 33 187 - -
Amo01g2466 251 MobiDBLite consensus disorder prediction 215 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2466 Amo-Chr1 83444788 83445825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2466 30 132 C2H2 Transcription Factor Family AT4G04885 36.190 3.38e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2466 K14400 - aip:107640327 414.846