Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2452 ATGCCATCCCATGGTCATGCATTTGCAATGGCTGTGGTTGCTGCAGCCATTGCTATGCTACTTGTTGCTGTGATTTTCTTCTACTTGAAAAAATTTGCTTGCTCTTGGCATTACCACCATAGACACAGAGTTGCAGCGAGTTTTCGAAGAGAAGCAGGATTTAACCAAGAGGATATAAGGAAAGTTAATAATATGAAAGGGTTACTTGCTGAAGAAAATGGGATTGATATTCTGTATATGGTGGAAACACAAGGAAGGCATTTCAAAACTAGTTTCCCAACTAGAATATTCAATCCMAGTTATGAAGATAATGAAGAAAAGGAAGAAGAAGAAAAGAGAATAGATGTATTGGTTCAAAGATCTATGCATTATGAGACTCAAGAGGTTCCATTGCTATGTGAATCTCCAGGTTCAGGTTTGATGATTCATGAGGATTTAGTTAAACCACTACAACCACCATCACCACCACCACCACCACCACCACCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCTTCCTCCAAGAAACAAAATTCCAAAAGCATCACCTGTGCCTTCATCATCAAAATCACCACCACCACCACCTAAAGGAAAAGCCAACATGGAAAACAACACCTTAGAGGTTGCAGAATCAAGAGAGAAGGGTGCTAGCCAAACAAGACTCAAACCTCTACATTGGGATAAGGTTGTAGCTAATGTTGATCATTCTACAGTGTGGGATCACATCAATGATGGCTCTTTCAGGTTTGACAATGAACTCATAGAAACACTCTTTGGATACTCAACCAAGAACCAAACCAATGAAAGAAACCTATGTCATGCATCTTCAGCTCAGTTATTCCTTGTGGACCCTAGAAAATCCCAAAACACATCAATTGTGCTAAGGTCTCTTGCAATTTCTCYCAAGGAAATTATGGACGCGCTCGATGATGGACAAGGAATCAGTCTTGAGACACTTGAAAAACTTACTAAGATAGCTCCTACACAAGAAGAAGAAGCCAAAATCATCCAATTCAGTGGAAATCCAGATAAACTTGCTCATGCTGATTCATTCCTCTACTGCATCCTCAAAGCGGTTCCAACAGCATTCATTCGCCTYAAAGCAATGCTTTTCAGATCAAATRATGATTTTGAAGCRGTTCAGCTTAAAGAAAACTTACAAACYCTTGAAAAGGGTTGCAAGGAGATGAGGGCTAGTGGCCTATTACTGAAGTTTCTTGAGGCAATTCTCAAAGCTGGAAACCGGATGAATGCCGGAACTTCTAGGGGAAATGCACAAGGTTTCAACCTAAGTGCTCTTAGGAAGCTTCCTGATGTGAAAAGCATTGATGGGAAGACTAGTTTGCTACACTTCATTGTAGAGCAGGTGGCTCAGTCAGAAGGAAGAAGAGAAGCTATGAATCAAAAGCATAACATTCCCAAAATCAARYGTGATATAAGCAACTCCAATGAAAACAATAATAGCCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATGCTTGGTTTACAAGTGTTATTGGGAGGTATAAAGGATGAYTTATCRGAAGTAAAGAAAGCAGCAATAATTGATCATCAGAATTTCATTAGGATGTTATACATTCTCAATGCTCGTGTSAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGAWAACAATGAGAGAGGTGGATTTWTTAAGGAAATGAAAGGGTTTGTKGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATCTSGGAGGRGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATTTTGTTGACATGGTGYATGAGGTTTGCAGTGATCTCAGAAGGAAGATAGAAAAGAAGAATGTAGGAGGAGGAGAAGGTGCATCAACAACACCACCTCTTTCACCCTCAAAGAAAGCACCACTCAGGTTCCCAAAGTTTGATTTGCACTTTCTATCAAACATGTCAAGTGCYACATCATGTTCTAGCCTATCAGATGATGATTTCTGA 2061 0.4017 MPSHGHAFAMAVVAAAIAMLLVAVIFFYLKKFACSWHYHHRHRVAASFRREAGFNQEDIRKVNNMKGLLAEENGIDILYMVETQGRHFKTSFPTRIFNPSYEDNEEKEEEEKRIDVLVQRSMHYETQEVPLLCESPGSGLMIHEDLVKPLQPPSPPPPPPPPPPPPPPPPPPSPPPLPPRNKIPKASPVPSSSKSPPPPPKGKANMENNTLEVAESREKGASQTRLKPLHWDKVVANVDHSTVWDHINDGSFRFDNELIETLFGYSTKNQTNERNLCHASSAQLFLVDPRKSQNTSIVLRSLAISXKEIMDALDDGQGISLETLEKLTKIAPTQEEEAKIIQFSGNPDKLAHADSFLYCILKAVPTAFIRLKAMLFRSNXDFEAVQLKENLQTLEKGCKEMRASGLLLKFLEAILKAGNRMNAGTSRGNAQGFNLSALRKLPDVKSIDGKTSLLHFIVEQVAQSEGRREAMNQKHNIPKIKXDISNSNENNNSLVQHETEKEYLMLGLQVLLGGIKDDLSEVKKAAIIDHQNFIRMLYILNARVSEIREIVTKCCGXNNERGGFXKEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGGGGGSNPFELFLIVRDFVDMVXEVCSDLRRKIEKKNVGGGEGASTTPPLSPSKKAPLRFPKFDLHFLSNMSSATSCSSLSDDDF* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2452 686 PRINTS Proline rich extensin signature 146 158 - -
Amo01g2452 686 PRINTS Proline rich extensin signature 158 179 - -
Amo01g2452 686 PRINTS Proline rich extensin signature 184 200 - -
Amo01g2452 686 MobiDBLite consensus disorder prediction 638 658 - -
Amo01g2452 686 ProSiteProfiles Formin homology-2 (FH2) domain profile. 216 649 IPR015425 -
Amo01g2452 686 Pfam Formin Homology 2 Domain 219 623 IPR015425 -
Amo01g2452 686 Coils Coil 566 585 - -
Amo01g2452 686 SUPERFAMILY Formin homology 2 domain (FH2 domain) 284 637 - -
Amo01g2452 686 PANTHER FORMIN-LIKE PROTEIN 5 681 - -
Amo01g2452 686 SMART it6_source 216 638 IPR015425 -
Amo01g2452 686 MobiDBLite consensus disorder prediction 149 203 - -
Amo01g2452 686 MobiDBLite consensus disorder prediction 129 225 - -
Amo01g2452 686 Gene3D Formin, FH2 domain 238 639 IPR042201 -
Amo01g2452 686 PANTHER FORMIN-RELATED 5 681 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo01g2452 686 Coils Coil 384 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2452 Amo-Chr1 82121465 82124028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2452 11 683 FH2 protein (formin) Gene Family AT1G70140 38.599 2.76e-144 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2452 - - aip:107618940 907.131