Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2449 ATGATCATTCCGGAGAAGAACCGCAAGGAGATCTGCAAGTACCTATTCCAAGAGGGAGTATGCTACGCGAAGAAGGACTTCAATCTTGCGAAACACCCTGAGATCGATGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCGAAGGAGTACGTTAGGGAGACGTTCGCCTGGATGCACTATTATTGGTTCCTCACCAACGACGGCATCGAGCATCTCAGGACTTACCTCAACCTTCCTTCTGAGATCGTCCCCGCCACTCTCAAGAAGCAGGCCAAGCCATCTGGCAGGCCTTTTGGCGGCCCACCGGGTGACCGCCCCAGGGGTCCACCTCGCTTTGAGGGAGAACGCAGATTTGGTGATCGTGATGGATACCGTGGAGGTCCCCGTGGACCTGGTGGTGATTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTGCTGGTGGAAGGCCTGGCTTTGGTCGTGGTGCTGGTGGTTTTGGAGGTGGTGCTCCAACAAGCTCAAATGCTTCTTAA 546 0.544 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKPSGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGAGGRPGFGRGAGGFGGGAPTSSNAS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2449 181 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 180 - -
Amo01g2449 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Amo01g2449 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 180 IPR037447 -
Amo01g2449 181 MobiDBLite consensus disorder prediction 91 181 - -
Amo01g2449 181 Gene3D - 1 104 IPR036388 -
Amo01g2449 181 MobiDBLite consensus disorder prediction 112 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2449 Amo-Chr1 82084642 82087162 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2449 1 154 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.226 8.33e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2449 K02947 - zju:107414743 227.639