Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2424 ATGAACATCGATGACAATAAGAACTTAGAGGAGTCTATCGAATGTGATGAGCTGTGTTTTGGATATGATAGTAGTTCTGATAAGGAGGAGGAAGATCTTATCAACAATGAGGGTAAATTTAGTGAATCCATGGAGGTATCGAATTGTAGCTATAAAATTCAAGAAGTTGAGAAGAAGTTAAATGAATTAAGCTATGATGACATGTGGGGTATTAAGTTTGATACTGTTGATCAATGTTGTGATTTTTATAGAAATTATGCTAGAGTGCACGGTTTTGTTGCGAGGCTTGACGAAAAAGGACAAGATTTCAATGGAAACCTTAATATGCGACAGATAATTTGTAACAGAGAGGGTACACGTAGAAAAAAGTACTTGGAGATGGAGAACAGGAAAAAGGATCACAAGCCAATCACACGCGTAATGTGTCAAGCAAAGATTAGATTTCACTATGACTTGATTTTACCAAAGTGGCGGGTCACCAAATTTGAAGAGACTCACAACGATGACCTCATCCCACCTAAGTATATCCAGTTCGTTCTGGCATATCGAACAATGACTGACGCTGATAAAGCACAGGCTGATAGTTTGCACTTTTATGAAGCTGGCAAATTAAATGTTGTTACACATTCATCTCCCATAGACAAAAGTACTAAAACAATAGTCAAGAAGACTAACGTTAATGCTGGGCGTAAAAAAGAATTATCACGCAAAGGTTCAGTTGGAAAAAAACTCTATTCTCCAAAATCGTCACCAACTGAAATTTCAAAGTCTTTGTTGGGTAAGGGTTCTCCAACTGGATATTCCATCAACCATAACACTTTGCCAAACTTAAGTTTGCGCCGGAACGACTCTGGAATTGAAGCACCATTTTGGCTTCCGGTTGTATTTAGACCACCTGCTGGAATGGAATTAGATGAAACAGACATACAAGTGGCTACATATATATTTGGATCTGACAAAGAAGATGAAATTAATAGACATGAAATTTTAGCAAAAGGTTCCAAATTTGATGCAAATAGAGACAGTTTTTTCAACTTAATTCCCAAGGGATGGATTGATGAAGATGCTATGTACATTGAAGAGATGCTTCAAGATGACTCATTTTATGATCTTGAAACCACTGTTAGGCCTAAAGTTTTTCGTTTCGCTGATCCAAAGCATATAGAAACAGGAGAACAAAAAATTGGCTCTAATGATTGTGGAATTTGGGTAGCAACTTGGATGAAAGATTATGCTAAAAATGACAATTATTCCGTCAAGGGGTGTGGTGATGGAGAACGCCGCTACGCTGGTGGATCAGAGGCGGCGAACACAGGAGTCACGGAGGCTCAGGACGTGAGAGACGGCGGCGACACAGCTGTTGGAGGCGGAAAGAGGGGGCGCTGTAATTGTGGTCACAGAGGCTAA 1407 0.3937 MNIDDNKNLEESIECDELCFGYDSSSDKEEEDLINNEGKFSESMEVSNCSYKIQEVEKKLNELSYDDMWGIKFDTVDQCCDFYRNYARVHGFVARLDEKGQDFNGNLNMRQIICNREGTRRKKYLEMENRKKDHKPITRVMCQAKIRFHYDLILPKWRVTKFEETHNDDLIPPKYIQFVLAYRTMTDADKAQADSLHFYEAGKLNVVTHSSPIDKSTKTIVKKTNVNAGRKKELSRKGSVGKKLYSPKSSPTEISKSLLGKGSPTGYSINHNTLPNLSLRRNDSGIEAPFWLPVVFRPPAGMELDETDIQVATYIFGSDKEDEINRHEILAKGSKFDANRDSFFNLIPKGWIDEDAMYIEEMLQDDSFYDLETTVRPKVFRFADPKHIETGEQKIGSNDCGIWVATWMKDYAKNDNYSVKGCGDGERRYAGGSEAANTGVTEAQDVRDGGDTAVGGGKRGRCNCGHRG* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2424 468 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 235 - -
Amo01g2424 468 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 30 235 - -
Amo01g2424 468 Pfam FAR1 DNA-binding domain 81 171 IPR004330 -
Amo01g2424 468 MobiDBLite consensus disorder prediction 227 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2424 Amo-Chr1 81363210 81370397 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g2424 FAR1 1.3e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2424 - - aip:107607226 401.749