Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2420 ATGAATGATTCAACTTCAAATCAGTTGAATGAGAACAATTTGGATTATTCTTCTGAAACGAATCATGCTGATGAGACCAGGTGTGTTGTGGATGAAAAATTTGTCCCAAAGGTGGGGATGATTTTCAAGACATTAGAAGAAGCTGGAAAGTTCTATAAACATTATTCCAAACTTGCTGGTTTTTCTACAAAAATAAGGAACACGACTCAGAAGGGAGACAAGGTTAAGAATCAACTAATCGTATGCAGTAGAGAGGAGATGTGGAAATCCAAGATATCTCTAACTTTGAAAACAAACCCCTCAGCCGGGTTAAACTATCCAGCTAGGATCTATGTACACATAATGAAGGACGTTGGTCTTTGGACAATTTTCAAAGTTGTTTTAAATCACTCACATCCCTGCTATCCAGACCGGGCAGAGATGCTCAGACAACACAGGGAGCTAAGCATGTTTTGGTTTACCACAGCGTATTGGTTCGGTTCATTCTGCAGAGCTGTACAAGGATCGGCATATATGGATTCCAGTTTACCTGGAAGACGATTCTGGGGTAGGATGAGAAGCACACAAAAGAGTGAGAGCATGCAAGCATTTTTCAACAAGTTTATCACATGCAACAGCTCCCTGAGACAATTTCAGAGAGCAAAGAGAGAGAGAGAATTTGATGCTGCAGATTTTCACACCGTGATACTGTACGCTACAAAATCAGCAATAGAGGCCCAGTTTCAGCACATGTATACCCATGAGAAGTTCAGGGAAGTTCAAGCACAATTCAGAGGTAAAATGAACTGCATCACAAGATCAGTGCATTTCACCCTAGGTTTCACAACAGCGAAGTCATAG 840 0.4095 MNDSTSNQLNENNLDYSSETNHADETRCVVDEKFVPKVGMIFKTLEEAGKFYKHYSKLAGFSTKIRNTTQKGDKVKNQLIVCSREEMWKSKISLTLKTNPSAGLNYPARIYVHIMKDVGLWTIFKVVLNHSHPCYPDRAEMLRQHRELSMFWFTTAYWFGSFCRAVQGSAYMDSSLPGRRFWGRMRSTQKSESMQAFFNKFITCNSSLRQFQRAKREREFDAADFHTVILYATKSAIEAQFQHMYTHEKFREVQAQFRGKMNCITRSVHFTLGFTTAKS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2420 279 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 12 147 IPR031052 GO:0006355
Amo01g2420 279 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 180 264 IPR031052 GO:0006355
Amo01g2420 279 PANTHER OS03G0843700 PROTEIN 12 147 - -
Amo01g2420 279 PANTHER OS03G0843700 PROTEIN 180 264 - -
Amo01g2420 279 Pfam FAR1 DNA-binding domain 50 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2420 Amo-Chr1 81299116 81301123 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo01g2420 FAR1 5.5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2420 - - adu:107470220 311.997