Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2346 ATGCCAGAATTTAAACCCTGCATCACATGCTTGTTCTTGATCGTGTCCTCGCTATTATTATTATCCCCAAATGTGGCTTCTTCCTCCGATGAGAATAACTCAGCGGATGAAGTCTTTATCCAGTGTGGGACCGACGAATACGCAGACTTGGGCCCCACCAAGTTCACCCGTACGTTCATGGCTCTTATGGACACGGTTTCAGTTAAGATCAAAGAGCAAGGCTGGAGCGCTGAATCGATTATCAACCCAGTTGCCCCGATTTTCGCACTAGCGGAATGCCGCAACGACCTCAACAATAGCAATTGCTACAAATGCTTCAACCACGCCAGGGAATATTTGTCGCAGTGCTTGCCAAAGGTAGCGGGGAGAGTTTACATGGACGGTTGCTTCCTTCGCTATGATAACTATGGTTTCTTCAACGAGGTATTAGACAAGAAGTACGACCATAGTGTTTGCATAAAGTCTTCCTGGATGGAGAAGATGGAGTATAATAGCACCGATAGTAATAATAGCAATGCAACGGACCCCGCTGGGTTCAGGGAAAAGGTTGGGAAGGCTGTAACGAACGTGACGGAGACGGCAGCCACGTCTGTTCATAAATTCGCAGTGAATGGGGATAACAAGGACGTGTTTGCGCTGGCGCAGTGTTGGCACACCTTGGACAGAGAAGGGTGTGAGAGGTGCTTGAAAAGAGCAGAGAGGAAATTGAGTGAGTGCATTATTGTTAATGATGAAGGTAAGAGCATGCTTGCCGGTTGTTTCTTGAAGTATTCCACTCGCAAATTCTACGGTGAAGAATTCGATGAGAACGGAGTCAAGAACAACTACGACAATTCTTATAACAAGGTGATCATTGTGTCTCTATCATCAGCGGTTGCTGTGACTTTGATTATTATCACAGGTGTGATGGTTAAGAAAAAGAAAGCACCGATTTGTACAGTAGGAATGGACCGTAGCAAGAGGTTTGAGTACGTGGCTGGATACACTTTTAAATATGAGTTGCTTGAAAAGGCGACCAATTATTTTGATCCTGCATGCAAACTAGGGCAGGGTGGAGCTGGTTCTGTGTTCAAAGGAACGCTACCTCAAGGAAAGACTGTGGCCGTGAAACGACTGTTTTTCACGACGCGACAGTGGACGGATGGGTTCTTCAATGAGGTTAATTCAATAACAGGGATTACCCACAAGAATGTGGTGAAACTTTTAGGGTGCAGTATTGAAGGCCCGGAAAGCCTCTTGGTTTATGAATTTGTGCCAAATGGGAGTCTTGAGCAAATACTTTTTGGTAGAGACTCAACAACTTTTTTGACCTGGAAGCAACGTTTTAATATCATATGTGGTGTAGCTGAGGCCCTAGCATACCTTCATGGAGGTACTGAATCAAAGATTATTCACAGAGACATTAAGTCCGGGAACATTCTGCTTGATGAGAATCTTGATCCGAAAATTGCTGATTTTGGTCTTGCTCGCTTTGTTACGGAAAATAGAAGTCATGTTACCACAGGAATTGCTGGAACATTGGGATATATGGCTCCTGAATATCTTCTTCAAGGACAACTAACAGAAAAAGCAGATGTCTATGCCTTTGGTGTGGTTGTTGCTGAAGTTGTATGTGGCAAGAAAAACAGTGTTTATACCCAGGGCTCAACTTCAGTACTCCATTGTATTTGGAAGAATTACAAGGCACAGAACATCACGGCATCAGTTGATCCTGCACTGAATGGTCAATTTGTAGAAGAAGAGGCATCAAATGCCCTCAYAGCTGCCCTTCTTTGCACACAGTCCTCTGTTTCTCTTAGACCATCCATGTCTCAAGTGCTTCAGATCCTAACCGATAAAGACTTTGTTGTTCCCTCCCCAAGGCAACGGCCATTCCTAAATTGCACTATGCTGAGCCTAGATGACCGAACACAAGCTACCTCCACCTTCACCCTGACTCCTGAAACTTCACCAAATGGCCCCGCCACCACTAGTGCAAGATCCTCTTTCCATACCACCACAGATTCATTTAGTTCAAATACACATGCAATTAATATTGCAGTACCTTCTGATCCAAGGGAGAATAATAATAACGATAATAATAATAATAAATAA 2094 0.4403 MPEFKPCITCLFLIVSSLLLLSPNVASSSDENNSADEVFIQCGTDEYADLGPTKFTRTFMALMDTVSVKIKEQGWSAESIINPVAPIFALAECRNDLNNSNCYKCFNHAREYLSQCLPKVAGRVYMDGCFLRYDNYGFFNEVLDKKYDHSVCIKSSWMEKMEYNSTDSNNSNATDPAGFREKVGKAVTNVTETAATSVHKFAVNGDNKDVFALAQCWHTLDREGCERCLKRAERKLSECIIVNDEGKSMLAGCFLKYSTRKFYGEEFDENGVKNNYDNSYNKVIIVSLSSAVAVTLIIITGVMVKKKKAPICTVGMDRSKRFEYVAGYTFKYELLEKATNYFDPACKLGQGGAGSVFKGTLPQGKTVAVKRLFFTTRQWTDGFFNEVNSITGITHKNVVKLLGCSIEGPESLLVYEFVPNGSLEQILFGRDSTTFLTWKQRFNIICGVAEALAYLHGGTESKIIHRDIKSGNILLDENLDPKIADFGLARFVTENRSHVTTGIAGTLGYMAPEYLLQGQLTEKADVYAFGVVVAEVVCGKKNSVYTQGSTSVLHCIWKNYKAQNITASVDPALNGQFVEEEASNALXAALLCTQSSVSLRPSMSQVLQILTDKDFVVPSPRQRPFLNCTMLSLDDRTQATSTFTLTPETSPNGPATTSARSSFHTTTDSFSSNTHAINIAVPSDPRENNNNDNNNNK* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2346 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Amo01g2346 697 Gene3D - 34 138 IPR038408 -
Amo01g2346 697 Gene3D - 160 262 IPR038408 -
Amo01g2346 697 ProSiteProfiles Protein kinase domain profile. 342 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2346 697 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 677 - -
Amo01g2346 697 Gene3D Phosphorylase Kinase; domain 1 307 417 - -
Amo01g2346 697 ProSiteProfiles Gnk2-homologous domain profile. 35 138 IPR002902 -
Amo01g2346 697 Pfam Salt stress response/antifungal 52 136 IPR002902 -
Amo01g2346 697 Pfam Salt stress response/antifungal 171 259 IPR002902 -
Amo01g2346 697 ProSiteProfiles Gnk2-homologous domain profile. 161 262 IPR002902 -
Amo01g2346 697 CDD STKc_IRAK 348 611 - -
Amo01g2346 697 MobiDBLite consensus disorder prediction 643 697 - -
Amo01g2346 697 Pfam Protein kinase domain 347 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2346 697 SUPERFAMILY Protein kinase-like (PK-like) 328 639 IPR011009 -
Amo01g2346 697 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 12 677 - -
Amo01g2346 697 SMART serkin_6 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2346 697 Gene3D Transferase(Phosphotransferase) domain 1 418 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2346 Amo-Chr1 78585201 78587941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2346 1 641 Receptor kinase-like Gene Family AT1G70520 37.348 3.32e-136 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo01g2346 Pkinase 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2346 - - ahf:112722338 1316.6