Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2308 ATGGATCTTCAGAACCTTATCTCTATCTTCACCACCTTCCTCTTTCTCTTTATGCTATTGAAAATAGCCATGAAGAAATTTAGTTCTTCCAAGGATATTACCAATTTACCCCCAGGGCCAAGAAAGCTACCCATAATAGGAAACATGCACAACCTTGTAGGATCAATGCCCCATGAATGCCTAAGAAACTTAGCATCCAAATATGGACCCTTAATGCACCTTAAACTAGGAGAAGTGTCCCACATAATAGTTACATCACCTGAAATGGCACAAGAGATTATGAAGACTCAAGATCTCAACTTTTGTGATAGGCCAAACCTTCTCTTTGCTAGAGTCATGACTTACAATCGCACCGACATTGCCCTTGGCCCCTATGGAGATTATTGGAGGCATATACGAAAGATCTGCAACATGGAGTTATTAACAGCAAAGCGTGTTCAATCTTTTAGGCACATAAGAGAAGCAGAGGTTTCAGAGTTGGTCAAAGCAATATCTCAAAGTCAAGGCTCCATTTTTAATCTCTCTCACAAGATTTTTTCAACGACCTACGGAATAGCAGCAAGAATAGTATTTGGTAAAAAATATAGCTACCAAGAATTTTTTATATCATCTATTGAGAAAGCAATTCAAATAGGAGGAGGAAATTGCATTGCTGATCTGTATCCTTCAATTAGAGTAGTGCTTGAAATGATGAGTAGAGACAAGGCTAAACTTGAAGAACTGTATATAAAGACTGATAAGGTATTACAAGACATCATAGATGATCATAGAAATAGAAAAGATGGCAAATGTGAAGAAGAAGAAGAAGGTAGTGAAGATCTAGTTGATGTTCTTCTCAAGTTTCAACAAATAGAATCTGAATATCCTTTGACTGATGACAACATCAAAGCAATCATCCAGGACATATTTACTGCTGGTGGAGAAACATCCTCAGCAGTTGTGGAATGGGCAATGGCTGAAATGATAAAGAATCCAAAAGTGATGGAAAGAGCACAATCTGAAGTTAGAAGGGTTTATGGTAACAAAGGGTATGTGGATGAATCAGAATTGCACCAATTAACATACCTTAAGTGTATCATCAAAGAAACCTTAAGGTTACATCCATCTGTGCCGTTGTTACTTCCAAGAGAGAACAGAGAACCATGCCAAATCAAAGGGTATCAAATTCCATCCAATTCTAGAATTATTATCAATGCTTGGGCAATTGGAAGAGATCCTAGGTATTGGATTGATGCCATGGATTTTAAGCCTGAGAGGTTTGTTGATGAATATTCAATTGATAATAGAGGCACAAACTTTGAGTTTATTCCATTTGGTAGTGGAAGAAGAATGTGTCCTGGAATTGCATTTGCTACACCAAACATGGAGTTGTCACTTGCTCAATTTCTTTACCATTTTGATTGGAAGCTTCCCAATGGAATCAAGAATGAGGAACTTGATATGACTGAGTTGTTTGGGATGACTATAAGAAGAAGAAATGATCTCTGCTTGATTCCCATTATTCATCATCAACCTTAA 1518 0.3735 MDLQNLISIFTTFLFLFMLLKIAMKKFSSSKDITNLPPGPRKLPIIGNMHNLVGSMPHECLRNLASKYGPLMHLKLGEVSHIIVTSPEMAQEIMKTQDLNFCDRPNLLFARVMTYNRTDIALGPYGDYWRHIRKICNMELLTAKRVQSFRHIREAEVSELVKAISQSQGSIFNLSHKIFSTTYGIAARIVFGKKYSYQEFFISSIEKAIQIGGGNCIADLYPSIRVVLEMMSRDKAKLEELYIKTDKVLQDIIDDHRNRKDGKCEEEEEGSEDLVDVLLKFQQIESEYPLTDDNIKAIIQDIFTAGGETSSAVVEWAMAEMIKNPKVMERAQSEVRRVYGNKGYVDESELHQLTYLKCIIKETLRLHPSVPLLLPRENREPCQIKGYQIPSNSRIIINAWAIGRDPRYWIDAMDFKPERFVDEYSIDNRGTNFEFIPFGSGRRMCPGIAFATPNMELSLAQFLYHFDWKLPNGIKNEELDMTELFGMTIRRRNDLCLIPIIHHQP* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2308 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Amo01g2308 505 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PANTHER CYTOCHROME P450 71D10 8 502 - -
Amo01g2308 505 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 Pfam Cytochrome P450 37 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 SUPERFAMILY Cytochrome P450 37 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g2308 505 PANTHER CYTOCHROME P450 71B11-RELATED 8 502 - -
Amo01g2308 505 Gene3D Cytochrome P450 29 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2308 Amo-Chr1 75837375 75839703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2308 7 503 Cytochrome P450 AT1G13110 40.000 5.53e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2308 - K23806 gmx:102670080 633.254