Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2296 ATGGCACATGAAAGAAAACACTATTGCTTCATCTTCTTCTTCCTCTTCCTTCTCAGTATCGTGTTTGCCCCGCTGTCACGGGCAGACAACGATACTCAAATTCTTTTGCGGTTCAAGAACTCGTTGTCCGATGCCGGCGCCTTACAAAATTGGGACGAGTCAATCAATATTTGCAGCTGGACCGGCTTGTTATGCAAAGATGACAAACTTCATGGACTAAAGCTAGAAAACATGGGATTAAGTGGCACCATTGACATAGACATTCTTTCCGAATTGTCTATTTTGAATAGCTTTAGTGTGATTAACAACAACTTTGAGGGTCCAATGCCGGAGTTCAAGAAGCTTGAGAGGCTAAGGGGATTGTTTCTTTCCAATAACAAATTCTCCGGCCAGATTCACGACGATGCATTCGTCGGCATGAGGAGGCTGAAGAGGGTATTCTTGGCGGAAAACGAGTTCAGCGGCCATATTCCTAGCTCTCTTGCTCAATTGCCAAGGCTTTTGGACGTGGACTTGCATGGAAATAGATTTGATGGTACCATACCTGAATTTGAGAATAGCGATTTTAGGGTTTTTGATTTATCAAACAATCAATTGGAGGGTTCAATTCCAAAAAGCTTGAGCAATGTGGATCCAAGTGCATTTGCTGGTAACAAAAGACTATGTGGAAAACCTCTAAGCAACCCTTGCAGCAATAATGAACAACCCACCCCTCAAAATGACAACAAAACTAACAAACATCGCACACTAATAATTATAATTATCATAGTGGTAATTGTGGTTATCTTGGTTCTAATCCTAGCACTCTTCATAATCATAAAGCGCAGAAGAAAAGCCAAAAACCCTAATCAGCTGGTAGAGGCTGCAAATGCATCAAAACCTCAGAGTAGTGTTGCAGTTTCAAGTGATGAGGCCAAGATGGCGACATCCATGGAGGCAAGGGCATCCATTGAGCCAAGTATATCAATAGAAACAAAATCCATAGACGTGGCTGCGACTGAGGCTGAGGCTGCGACAGCCCTGTTATCCATTCAGAGTGTTGAAGATGGTGGCGGCGGCCACGGAGGAGGAGGAGGAGGAGGAGAAGACTTTAACTTTGTGAGGGAAGATAGAGAGGTTTTTGATCTGCAATACCTGCTGAGGGCCTCGGCCGAGGTACTCGGCAGTGGAAGCTTTGGATCAACCTACAAAGCTATGATTCATAGTGGTCAAGTTGTGGTGGTGAAGAGGTTCAAGAACATGAACAAGCTTGGAAAACAAGAATTCTTTGAGCACATGAGAAGGCTTGGGAGGTTGACACACCCTAATGTGCTCCCTCTTGTTGCATTCTACTATGGAAAAGAAGAGAAGCTTCTGGTCTATGACTTTGTTCAAAATGGGAGTTTGGCTAGTCATCTTCATGGAGTAGCAAGAGGCTTGGCATACTTATACAAGGAATTTCCAGACCAAAAACTGCCCCATGGACACCTCAAATCCTCAAATGTTTTGTTAGATCATGCATACAAGCCTCTTTTAACAGAATACCAACTCGTGCCAGCAATAAACAAAAGCCACGCCCAGCAATTCATGGCAGCGTTTAAGTCTCCCGAGGCAAGCCAGCACGACAGTCCTGGCGACAAGACTGACGTGTGGTGCCTCGGGATCCTTATACTGGAGTTGCTGACAGGAAGGTTTCCTGCAGATTACGTGAGGCACGGAAAGGGTGCGAGCGAGGAACTAGAGACATGGGTGAAATCTATTGTGAGTGGAGAGGTGATTGATAAGGACATGGTTGGAGGAAGCAATGGTCAAGGGGAGATGTTGAAGATGTTGAGGGTTGGGATGGGGTGTTGTGAGTGGAATGAGGGGAGTAGGTTGGAATGGAAGGAAGCTTTAGCCATGATTGAGGAGGTGAAAGAGAAAGATAACATGGAAGATGAATCTTCTGGTTTTAGTGAGTGGGACTTGTCCTTTTATTCGGAAACTCTTTAG 1971 0.448 MAHERKHYCFIFFFLFLLSIVFAPLSRADNDTQILLRFKNSLSDAGALQNWDESINICSWTGLLCKDDKLHGLKLENMGLSGTIDIDILSELSILNSFSVINNNFEGPMPEFKKLERLRGLFLSNNKFSGQIHDDAFVGMRRLKRVFLAENEFSGHIPSSLAQLPRLLDVDLHGNRFDGTIPEFENSDFRVFDLSNNQLEGSIPKSLSNVDPSAFAGNKRLCGKPLSNPCSNNEQPTPQNDNKTNKHRTLIIIIIIVVIVVILVLILALFIIIKRRRKAKNPNQLVEAANASKPQSSVAVSSDEAKMATSMEARASIEPSISIETKSIDVAATEAEAATALLSIQSVEDGGGGHGGGGGGGEDFNFVREDREVFDLQYLLRASAEVLGSGSFGSTYKAMIHSGQVVVVKRFKNMNKLGKQEFFEHMRRLGRLTHPNVLPLVAFYYGKEEKLLVYDFVQNGSLASHLHGVARGLAYLYKEFPDQKLPHGHLKSSNVLLDHAYKPLLTEYQLVPAINKSHAQQFMAAFKSPEASQHDSPGDKTDVWCLGILILELLTGRFPADYVRHGKGASEELETWVKSIVSGEVIDKDMVGGSNGQGEMLKMLRVGMGCCEWNEGSRLEWKEALAMIEEVKEKDNMEDESSGFSEWDLSFYSETL* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2296 656 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Amo01g2296 656 SUPERFAMILY L domain-like 30 210 - -
Amo01g2296 656 Gene3D Transferase(Phosphotransferase) domain 1 457 648 - -
Amo01g2296 656 Gene3D Phosphorylase Kinase; domain 1 367 456 - -
Amo01g2296 656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 468 - -
Amo01g2296 656 Pfam Protein kinase domain 384 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2296 656 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 10 468 - -
Amo01g2296 656 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 468 641 - -
Amo01g2296 656 SUPERFAMILY Protein kinase-like (PK-like) 385 631 IPR011009 -
Amo01g2296 656 Gene3D Ribonuclease Inhibitor 29 136 IPR032675 -
Amo01g2296 656 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 468 641 - -
Amo01g2296 656 Gene3D Ribonuclease Inhibitor 137 234 IPR032675 -
Amo01g2296 656 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Amo01g2296 656 ProSiteProfiles Protein kinase domain profile. 381 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2296 656 Pfam Leucine rich repeat 117 177 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2296 Amo-Chr1 74596888 74601810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2296 11 631 Receptor kinase-like Gene Family AT4G31250 41.743 2.17e-173 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo01g2296 Pkinase 2.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2296 - - adu:107470884 1233.78