LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo01g2291	TCAGGTGTAGATCAGAATTTTTTGGGTCCTCTCTTTGTTGTTGATGACCAGTTTGTTCCCAAGGTTGGAATGACCTTTACCACCTTTAAAGATGCTGGAAAATTTTACAGGAACTACGCCAAGGCTGCAAGATTTTCTATAAGAGTTCGGAGCACAAATAGGAAGGGAAACGAGATTAAGAATCAATTGATTACATATAGCAGAGAGGAAAAATGGAAGTCTAAAATATCTCCGACTGAGAAGACGAATCCGACAGCCGGTTTAAACTGTCCTGTAAGAATTTATATACACACATTGAAAGATGTTGGTGCTTGGATCATTTCAAAGGTTGTGTTGGATCATTCACACCCCTGCTGTCCAAGTAAAGCAGAGATGTTCAAACAACACAGGGAACTAAGCATGTCCATTCGTCGTACAATAGAGAATAATGAGGAGGCTGCACACAAAGGAGTGAGAGCATGCATTCATTTTTTAACAAGTTTATTACCTGGAACAGCTCGCTTATTCAATTTGTCAAACAATACAATAATTGCCCCGGAAGCAGGGAGCAAGCAGAGAGAGAATCAGGGGCTGCAGATTTTCATACGGTCATACCATGTGCAACCAAATCCTCCATCGAAGCTTAGTTTCAAGATAAAGGCAAATTGCATAACTAGATTAACGAATTCTACTCTAGGCTATTCAGTATACGAAGTTGGAGAACAAGTTTTCAGCTCAATTCAACAAGTTTGTGGTTACTTACGACTCAGTAGCAGCCGAGGTAAAATGCCAATGCTTATTATTCGAGTCAAGAGAGATACTGTGCCTGTCACGCTGAAGAACTGA	825	0.4036	SGVDQNFLGPLFVVDDQFVPKVGMTFTTFKDAGKFYRNYAKAARFSIRVRSTNRKGNEIKNQLITYSREEKWKSKISPTEKTNPTAGLNCPVRIYIHTLKDVGAWIISKVVLDHSHPCCPSKAEMFKQHRELSMSIRRTIENNEEAAHKGVRACIHFLTSLLPGTARLFNLSNNTIIAPEAGSKQRENQGLQIFIRSYHVQPNPPSKLSFKIKANCITRLTNSTLGYSVYEVGEQVFSSIQQVCGYLRLSSSRGKMPMLIIRVKRDTVPVTLKN*	275

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo01g2291	274	Pfam	FAR1 DNA-binding domain	34	119	IPR004330	-
	Amo01g2291	274	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	18	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo01g2291	Amo-Chr1	74203158	74205129	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo01g2291		FAR1	4.1e-07	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo01g2291	-		-	adu:110278638	253.832