Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2239 ATGCCTTCCGCTGTAGGTTATCAACCGACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTGACCGACCCTGTCCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCGGATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACCTTACAGCGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGCATCGCTTAACTGTAGCAAGAGCACGGAAAATTGAGCGTTTCTTATCACAGCCTTTTTTCGTAGTAGAAGTATTTACCGGTTCGCCAGGAAAATATGTA 474 0.4241 MPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPVPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEHRLTVARARKIERFLSQPFFVVEVFTGSPGKYV 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2239 158 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 1 81 IPR000194 GO:0005524
Amo01g2239 158 ProSitePatterns ATP synthase alpha and beta subunits signature. 72 81 IPR020003 GO:0005524
Amo01g2239 158 CDD ATP-synt_F1_beta_C 88 158 - -
Amo01g2239 158 Gene3D - 1 81 IPR027417 -
Amo01g2239 158 PANTHER ATP SYNTHASE 1 158 - -
Amo01g2239 158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 86 IPR027417 -
Amo01g2239 158 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 158 - -
Amo01g2239 158 Gene3D - 84 158 IPR024034 -
Amo01g2239 158 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 84 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2239 Amo-Chr1 70655629 70656102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2239 1 145 Primary Pumps ATPases(2) AT1G78900 28.571 5.22e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2239 K02112 - gmx:3989272 302.753