Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2148 ATGACGGTGTTTTCCGGCAGCAGACAAGTGTTTCCGATTGACTTCGAGGCGGAGGTCTCGCAGCGCCTTCTAGAAGCTTCTAACTCCGGCGATCTGACCTCCGCGCTCTACTGCATCGCTGATCCCTCCGTCGACGTCAACTTTGCCGGCGCCGTCACGCTCAGGACTCGCCACGCGGACCTCGTCCCTTTGCCGGAATCCGCTAGCCAGGTCCGCGTTGAGTTCCACGACTTCGTCACCGACGTCACGCCGCTCTTCCTCGCCGTACACTCAGGGAACGCCACACTCGTCAGGAAGTTACTGGGTAAGGGAGCTGATGTAAACCAGAAGCTCTTCAGGGGCTTTGCAACGACTGCAGCAGTAAAGGAAGGCCATATTAGTATCCTTGAGATGTTACTGAAAGCAGGGGCATCACAACCAGCATGTGAAGAAGCTCTTGTTGAGGCAAGCTGCCATGGGCAAGCAGGGTATGCTGAGTTACTCATGAGCACTGATTTGATCAGACCGCACGTTGCTGTTCATGCTCTTGTGACCGCATGCTGTAGAGGATTCGTTGATGTGATTAGGATGCTTATAAAGCGCGGTGTGGATYTCAATGCAACAGACCGGGTGCTTTTGCAGTCACTTAAGCCTTCTCTTCATGCAAATGTGGACTGTACTGCGCTTGTCGCAGCTGTAATTCACAGGCAGCTCCCTGTTGTGGATTTGCTACTGAAGAATGGTGCTAGGATAGATTCTGAGGTGAGGCTTGGAGCATGGTCATGGGATACATTTCAACATGGTGAAGAGCTTCGTGTTGGTGCTGGTCTGGGAGAACCATATGACATTGCCTGGTGTGCAGTTGAGTATTTTGAAAGGAGTGGTGCCATATTGCGGTTGATCCTACAACATATCTCCTCCAAGAATCCTCACCATGGAAGAACCCTTCTGCACCATGCCGTCCTTTGTGGCAATGATGAAGCCGTCAGAGCACTCTTAGAATTCGGTGATAGCGTGGAATCTCCAGTCAAAACAACCAACAAGGCTGAGTTCCTTCCTTTACACATGGCATCCCGACTTGGCTTTCCAACAATCATTCAATGCCTTATTGATTTTGGTTGTGATTTGAACTCAATAACAGACTCAGGTGACACAGCTTTGATAATCTGTGCAAAATATAAACAAGAGGAGTGTCTCAAAGTACTAACAAGGGCAGGTGCTGATTTTGGTTTGGTGAATGTTTTTGGTCAATCTGCATGTTCAATTGCAGAGGCAAACAAGTGGTCACATGGTTTTCAACAGGCATTGTTGGATACAATCCGAAAAGGCAAGATACCAAAATCCGGCAATATTTCTGTGTTTTCGCCGTTATTGTTCACAGCTCAAGCTGGGGATGCGGAAGCACTGAAAACTCTAGTTGAATCTGGAGAGTTTGATCTTGACTATCAAGATGAGAGAGGCTTCTCTGCAGTTATGGTTACTGCTCTAAATGGCCATGCTGAATCATTTCGGTTGCTTGTATATGCTGGTGCTGATGTGAAGTTATGCAATAAATATGGTGAAACAGCAATAACTCTATCTAAACTGAATCAGAACTGTGATCTATTTGAACAGGTCATGCTTGAATTTGCAATTGAAAAGGGCAATCGCAATGCCTGTGGCTTCTACGCTTTACATTGTGCAGCTCGTCGTGGAGACTTGGATGCTGTCAAATTGCTCACAAACAAAGGCTATGATGTGAATGCCCCTGATGGGGAGGACTACACTCCTCTTATGTTAGCAGCAAGGGAAGGCCATGCATCCATTTGCAAACTTCTGATTTCATGCGGTGCTCATTGCAATGCTAAGAATTCTAGAGGGGAAACTCCACTTCTATTTGCAAGGAAATCTTCAGGAGGGMSTAAAAATGAAGCACAGGCCGTTATTCTAGACGAATTAGCGCGAAAACTGGTGCTACATGGCTCCTATGTATTGAAGCACACAAAATGCGGGAAGGGCTCCCCACATGGGAAACAAATAAGGATGTTAGGATCTGCAGGTGTTCTTTGTTGGGGGAAATCAAGCAGCAGAAACGTGATCTGCCGTGAGGCAGAGTTAGGGGCAAGTTCGACATTACGTAGAAACAGGTACAAGAAAGGTGATGCAGATGAACCTGGAATGTTTAGAGTGCTCACGAACAAGAACAAGGAAGTGCATTTTGTATGTGATGGGGGTTTAGAAGTTGCTGAGCTTTGGGTCAGAGGTATAAAACTTGTAACGAAAGAGGTTTATTTTGTTAAGGGATCCATCTCATAA 2274 0.4675 MTVFSGSRQVFPIDFEAEVSQRLLEASNSGDLTSALYCIADPSVDVNFAGAVTLRTRHADLVPLPESASQVRVEFHDFVTDVTPLFLAVHSGNATLVRKLLGKGADVNQKLFRGFATTAAVKEGHISILEMLLKAGASQPACEEALVEASCHGQAGYAELLMSTDLIRPHVAVHALVTACCRGFVDVIRMLIKRGVDXNATDRVLLQSLKPSLHANVDCTALVAAVIHRQLPVVDLLLKNGARIDSEVRLGAWSWDTFQHGEELRVGAGLGEPYDIAWCAVEYFERSGAILRLILQHISSKNPHHGRTLLHHAVLCGNDEAVRALLEFGDSVESPVKTTNKAEFLPLHMASRLGFPTIIQCLIDFGCDLNSITDSGDTALIICAKYKQEECLKVLTRAGADFGLVNVFGQSACSIAEANKWSHGFQQALLDTIRKGKIPKSGNISVFSPLLFTAQAGDAEALKTLVESGEFDLDYQDERGFSAVMVTALNGHAESFRLLVYAGADVKLCNKYGETAITLSKLNQNCDLFEQVMLEFAIEKGNRNACGFYALHCAARRGDLDAVKLLTNKGYDVNAPDGEDYTPLMLAAREGHASICKLLISCGAHCNAKNSRGETPLLFARKSSGGXKNEAQAVILDELARKLVLHGSYVLKHTKCGKGSPHGKQIRMLGSAGVLCWGKSSSRNVICREAELGASSTLRRNRYKKGDADEPGMFRVLTNKNKEVHFVCDGGLEVAELWVRGIKLVTKEVYFVKGSIS* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2148 757 Gene3D - 531 634 IPR036770 -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat profile. 305 337 IPR002110 GO:0005515
Amo01g2148 757 ProSiteProfiles Ankyrin repeat region circular profile. 546 577 - -
Amo01g2148 757 Gene3D - 13 168 IPR036770 -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat region circular profile. 80 108 - -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat profile. 479 511 IPR002110 GO:0005515
Amo01g2148 757 Pfam Ankyrin repeat 83 108 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 445 475 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 546 575 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 171 200 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 305 334 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 479 508 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 111 141 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 342 371 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 375 404 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 579 608 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 80 109 IPR002110 GO:0005515
Amo01g2148 757 SMART ANK_2a 217 246 IPR002110 GO:0005515
Amo01g2148 757 SUPERFAMILY Ankyrin repeat 301 621 IPR036770 -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat profile. 546 578 IPR002110 GO:0005515
Amo01g2148 757 ProSiteProfiles Ankyrin repeat profile. 80 112 IPR002110 GO:0005515
Amo01g2148 757 SUPERFAMILY Ankyrin repeat 61 246 IPR036770 -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat profile. 579 611 IPR002110 GO:0005515
Amo01g2148 757 Gene3D - 279 426 IPR036770 -
Amo01g2148 757 Pfam Ankyrin repeats (3 copies) 289 371 IPR002110 GO:0005515
Amo01g2148 757 Pfam Ankyrin repeats (3 copies) 527 610 IPR002110 GO:0005515
Amo01g2148 757 Gene3D - 427 530 IPR036770 -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat region circular profile. 579 610 - -
Amo01g2148 757 PANTHER ANKYRIN DOMAIN PROTEIN 6 751 - -
Amo01g2148 757 Gene3D - 169 259 IPR036770 -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat profile. 175 203 IPR002110 GO:0005515
Amo01g2148 757 ProSiteProfiles Ankyrin repeat region circular profile. 305 333 - -
Amo01g2148 757 PANTHER ANKYRIN REPEAT-CONTAINING 6 751 - -
Amo01g2148 757 ProSiteProfiles Ankyrin repeat profile. 342 374 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2148 Amo-Chr1 64697357 64704119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2148 450 616 Ion Channels AT2G25600 28.743 1.13e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2148 - - adu:107494823 1239.94