Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2145 ATGGGATCTGATCTCTTCAGTTCATATGCCGAGTCATCCTGTGCTGCCCTTGTTGTTGCTTCCATCTCCTCTTTTGGGGTGAACCATGAGTTGACTGCTATGTTGTACCCTCTCATTGTCAGCTCTGTGGGTATTATAGTCTGTTTACTTACCACCTTATTTGCAACTGACTTTTTTGAGATAAAGGCTGTGAAGGAAATTGAGCCGGCATTGAAAAATTAA 222 0.4234 MGSDLFSSYAESSCAALVVASISSFGVNHELTAMLYPLIVSSVGIIVCLLTTLFATDFFEIKAVKEIEPALKN* 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2145 73 Pfam Inorganic H+ pyrophosphatase 1 70 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Amo01g2145 73 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 73 - -
Amo01g2145 73 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 73 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2145 Amo-Chr1 64647389 64648115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2145 1 73 Primary Pumps ATPases AT1G15690 83.562 4.30e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2145 K23025 - gmx:100775864 136.732