Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2144 ATGATGCTCACTTTGATTGCTGAGTATCCTCATGTTATTGTTGGCTATGATGGTGCGACCTTAGGAACACTTCGGGACAAGGGTAAGAGAAAGCTACCTATCAATCAAGGTAGCACGAAGAACTACAAGTTGAGGTATCTGAAGGCAGTAATAAGGCCATCAATGTTCAAACTGCAGTCATTACCGATAACTCCGGATGAGCTCCCAAACCGTACCTCGTTCCTGGACCTGGTTGTGCCTGACGAAAGGAACAACCCCTTTTGGTGCTTTTGGTCACCAATTCAAAATGGCAAAATTGCCTTGACGCGTGGATGGCAGGAGTTCTACCAGACGTACAAAATCAATCTTGACTCCATGCTCTATTTCAAACACAAAGGAAACTCTAATTTCCAAGTCCAGATATTTGATTTTAGTGGCATTGAGAATTCATACCAACTCCGTGATCCGGAAGAACCACCATATGTAAGGACTAGTAACTTTCAAACTGCAAAGTGTATCAACATCCCTCCTTCAGCCAGGGTTAAAGCCGTTGCCGCTAAGGTATCTACCAAGTGGCCCTTTTTTGTGATGGATCTAACTGCTCGCATGATGTCGTCTCGATTGTTGCCCAATGTCCCTCATCTTAGTCACTTCACTGCTCAGAGGCACCCTCTCATCCTTACACATGGACACATAAAAGTGGAAGCTACATACACAAGGTATAGTGGAAAAAGGGACGGTAGCTTCGGCGTTATATCTGGAGGATGGAAAAATTTTGCTTTATTGTGTAACTTTAATACAGGTGGTGTAGGGATCTTCGAGGTGATATCCACTGAGCCAATCACGATCATCCAGGTTCGATGCAGATAG 849 0.4429 MMLTLIAEYPHVIVGYDGATLGTLRDKGKRKLPINQGSTKNYKLRYLKAVIRPSMFKLQSLPITPDELPNRTSFLDLVVPDERNNPFWCFWSPIQNGKIALTRGWQEFYQTYKINLDSMLYFKHKGNSNFQVQIFDFSGIENSYQLRDPEEPPYVRTSNFQTAKCINIPPSARVKAVAAKVSTKWPFFVMDLTARMMSSRLLPNVPHLSHFTAQRHPLILTHGHIKVEATYTRYSGKRDGSFGVISGGWKNFALLCNFNTGGVGIFEVISTEPITIIQVRCR* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2144 282 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 171 277 - -
Amo01g2144 282 SUPERFAMILY DNA-binding pseudobarrel domain 182 275 IPR015300 -
Amo01g2144 282 Gene3D - 170 281 IPR015300 -
Amo01g2144 282 Gene3D - 23 139 IPR015300 -
Amo01g2144 282 SUPERFAMILY DNA-binding pseudobarrel domain 68 138 IPR015300 -
Amo01g2144 282 PANTHER B3 DOMAIN-CONTAINING 94 150 - -
Amo01g2144 282 PANTHER B3 DOMAIN-CONTAINING 171 277 - -
Amo01g2144 282 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 94 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2144 Amo-Chr1 64596038 64598630 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2144 77 145 B3 DNA Binding Superfamily AT3G18990 37.681 4.95e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2144 - - adu:107488680 419.853