Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2135 ATGCGTTCTGACACTTCCAAATTCCCCAAACCCTTCCACCTCACAGACAACCTACGAGTTTCCGAAACGCACTCCAACAAAAAGAGAGAAACACAGAAAGACAAAATACACCGCGCTGGTGGACGAGGAATGGCCACCACTAGCCTCGACGGCGCCGGAGAAGATCGTGTTCTGGCGACGGCGCAGCAGATCCTCATGAGTCTCAACACTCCCAAGGAGGTTCGCCAGGACATGCTCCTCATTTTCTCCTCCTTCGATAACCGTCTCTCTACCATTTCTGACCTCATCGACGCCGACAACGACTCCAAGTCCACCATCTCCGACGCCGTTCCCGCCGATGAGGAGGAACAAGAAGAAGACCTTGACCGCCTCGAGGCCGCCATGAAAGTCATCCTCCGCTGGGACGCCTCCTTCTCCGGCGGCGGCGATTCCTTGCGCCACTCCACCTCCATCCTTGACTCGCATGTCCACAGAGTAGAGTACTTCTCTGCCGTTGATGACATCATCCAGTGGATCGATGAAAATCTCTCGTTAGCGCCGCCGTTGCCACCTCGCCGAGCCGCCATGTGTGACCGCGCCGAAAAGGCTATCCAGATCGCGATGACAAGGCTCGAGCACGAGCTCCGCCATGTGCTGATCCGCAGCACCGTCCCCCTAGACGCCGACAGCCTCTACAGCTCGGTGCATAGAGTTTCACTCTCGTTGGCCTCACACGACGGCGCCGCCGCCGCCGAAATCGACGGAAGCTCGGAGAGCTTTGGCAAAACCCCAAATCACCGGTTCCACGAGCGCGTCGCGAGCTTTGAAGACGAAAACGAAAACGATGGCGTTTCAATCAATTTGGTGCATCCCGATGCGGTTCCAGAGCTGAGAGAAATCGTAACTCGAATGATAAGGTCTGGTTACGAAAGAGAGTGCCTTCAGGTTTATAGCGGTGTTAGGCGTGACGCTTTGGATGAGTGCTTGGCTATTATTGGTGTCGAGAGGTTGAGTATCGAAGAGGTTCACAGGGTTGAATGGAAGGTTCTAGATGAGAAGATGAAGAATTGGGTTCATGCTCTTAAGATTAGTGTTGGGGTTTTGCTGAGTGGTGAGAAGAGGCTCTGTGAAAATGTGTTTGGGGATTTGGTTGAGGTCAAAGAGGTATGTTTTAATGAGATTGCTAAAGGGTGTGTTATGCAGTTGCTGAATTTCGCGGAGGCTGTCTCAATTTGTAAGAGGTCCCCGGAGAAGTTGTTCAGGATATTGGATATGTACGAGGCATCGAGGGATGTTCTACCTGATTTGGAGGCGATGGTTTCTGATGAGTTTGTGGCTGGTGAGGCCAGGGGAGTGCTTAGTGGACTCGGCAATGCCGTGATAGGGACGTTTGCCGAGTTTGAGAATTGTATTAGGAATGAGACTTCCAAGAAGCTGGTGATTACAGGGGATGTTCATCCGTTGGCTCGATATGTGATGAACTACCTAAAGTTGCTTGTGGATTACAGTGATCCCTTGAACTTGCTCTTGGAAATCAGAGAAGAGGATCTTTATCGGTTTCAAAATGATTTCCAGGGTGATGTTTCCCAGCTAGAGGCCATTTCTCCCTTAGGACAAAGAACGTTGTTGTTGATGTCTGAGCTTGAGTTTAACCTTGAGGAAAAATCAAGGCTCTATGAGGACAACGCACTGCAGCAGATATTCTTGATGAACAATCTCTATTACCTAGTGTGGAAAGTGAGAGACTCCGAAATCAGGAAGGTCTTAGGGGATGATTGGATCCGGAAGCGCCGTGGCCAGATTCGCCAGTATGCTACAGGCTATCTCAGGGCCTCTTGGACCAGAGCCTTGGCTTGTTTGAAGGATGAAGGAATTGGAGGGAGCTCTAGTCTTAGTAGTGCCTCAAAGATGGCCTTGAAGGAAAAGTTCAAGAGTTTCAATGCCTGTTTTGAAGAGATTTATAGGATTCAGACAGCTTGGAAGGTACCGGATGACCGGCTTCGTGAAGAGCTGCAGTTATCTATTTCGGAGAAGGTGATTCCGGCCTACCGCTCGTTTGTGGGAAGGTTTAGCAGTCATCTAATAGAAGGAAGGCATGCTGGAAAATACATTAAGTATACCCCAGAGGATCTTGATACCTATTTATTGAATTTATTTGAAGGGTCCCCTGCTGTATTGCATCACATAAGGAGAAAAAGTACATAG 2184 0.4986 MRSDTSKFPKPFHLTDNLRVSETHSNKKRETQKDKIHRAGGRGMATTSLDGAGEDRVLATAQQILMSLNTPKEVRQDMLLIFSSFDNRLSTISDLIDADNDSKSTISDAVPADEEEQEEDLDRLEAAMKVILRWDASFSGGGDSLRHSTSILDSHVHRVEYFSAVDDIIQWIDENLSLAPPLPPRRAAMCDRAEKAIQIAMTRLEHELRHVLIRSTVPLDADSLYSSVHRVSLSLASHDGAAAAEIDGSSESFGKTPNHRFHERVASFEDENENDGVSINLVHPDAVPELREIVTRMIRSGYERECLQVYSGVRRDALDECLAIIGVERLSIEEVHRVEWKVLDEKMKNWVHALKISVGVLLSGEKRLCENVFGDLVEVKEVCFNEIAKGCVMQLLNFAEAVSICKRSPEKLFRILDMYEASRDVLPDLEAMVSDEFVAGEARGVLSGLGNAVIGTFAEFENCIRNETSKKLVITGDVHPLARYVMNYLKLLVDYSDPLNLLLEIREEDLYRFQNDFQGDVSQLEAISPLGQRTLLLMSELEFNLEEKSRLYEDNALQQIFLMNNLYYLVWKVRDSEIRKVLGDDWIRKRRGQIRQYATGYLRASWTRALACLKDEGIGGSSSLSSASKMALKEKFKSFNACFEEIYRIQTAWKVPDDRLREELQLSISEKVIPAYRSFVGRFSSHLIEGRHAGKYIKYTPEDLDTYLLNLFEGSPAVLHHIRRKST* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2135 727 PANTHER EXOCYST COMPLEX PROTEIN EXO70 112 726 IPR004140 GO:0000145|GO:0006887
Amo01g2135 727 MobiDBLite consensus disorder prediction 1 51 - -
Amo01g2135 727 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 112 726 - -
Amo01g2135 727 Gene3D Exocyst complex component Exo70 151 719 - -
Amo01g2135 727 Pfam Exo70 exocyst complex subunit 348 709 IPR046364 GO:0000145|GO:0005546|GO:0006887
Amo01g2135 727 SUPERFAMILY Cullin repeat-like 155 713 IPR016159 -
Amo01g2135 727 MobiDBLite consensus disorder prediction 20 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2135 Amo-Chr1 64224038 64226820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2135 55 726 EXO70 exocyst subunit family AT5G50380 56.034 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2135 K07195 - adu:107489765 1389.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g2386 08 37464248 37468415 Amo01g2135 01 64224038 64226820 PCT