Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2122 ATGGAGATTTCAGGCGCCGTTCTAAGGAATTTCACGTTCAGTGATTCAGGGCATGTGCAGTATTACAGGGACGAAAAGAAGGAGTATGGAACCACTATGTTGAGCGCCAAGAAAAAACTCAAGATGCTGAAGAAACGTTCCTTGATATATTGCATGAAGCTCCCTCCACATGGCAGCTTATCATCCGTACTTTATGAGAAGCTCAATTGGAGTCTCAGATTTAAGATTATTTTGGGAACTGCCGAGGAACTTTGCTATCTTCATGAGAGATGTCAAAGAAGGATCATTCACAAGGATATCAAGGCTTTTAATATTCTTCTCTCTGAGACTTTTGAGCCTCAGTTATCTGATTTTGGCCTAGCAAAGTGGTTACCTGACCTATGGACTCACCATACTGTTTCCAAAGTAGAAGGCACATTCGGGTACCTTATCCCTGGATTCTTCATGCATGGAATAGTAGATGAGAAAACTGATGTATATGCTTACGGTGTGCTATTATTGGAGCTAATTACTGGAAGACAAGCTTTGGATAGCTCACAAAAAAGTCTTATCATGTGGGCAATGATAAATGATATATTCGCTCACCGCAAGCCTGCAAGGGTTTTTGAAAGTTATGCTACCTTAGCCATAGGAACTGAGTGGATTTTTCGCCCCAAGCAAGAAGTGATCTCTCTGCATTATATAACAACCAGGGCAGAGGAGTGGGCAGTGGCCCTTCTTCTTTGA 726 0.4201 MEISGAVLRNFTFSDSGHVQYYRDEKKEYGTTMLSAKKKLKMLKKRSLIYCMKLPPHGSLSSVLYEKLNWSLRFKIILGTAEELCYLHERCQRRIIHKDIKAFNILLSETFEPQLSDFGLAKWLPDLWTHHTVSKVEGTFGYLIPGFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLIMWAMINDIFAHRKPARVFESYATLAIGTEWIFRPKQEVISLHYITTRAEEWAVALLL* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2122 241 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2122 241 SUPERFAMILY Protein kinase-like (PK-like) 45 194 IPR011009 -
Amo01g2122 241 Pfam Protein kinase domain 44 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo01g2122 241 ProSitePatterns Serine/Threonine protein kinases active-site signature. 95 107 IPR008271 GO:0004672|GO:0006468
Amo01g2122 241 Gene3D Transferase(Phosphotransferase) domain 1 24 220 - -
Amo01g2122 241 PANTHER OS08G0249100 PROTEIN 47 187 - -
Amo01g2122 241 SMART serkin_6 22 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2122 Amo-Chr1 63362838 63365392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2122 68 215 Trihelix Transcription Factor Family AT1G68690 45.395 1.46e-36 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Amo01g2122 Pkinase 4.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2122 - - gmx:102670300 242.662