Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2073 ATGCCTCATCTATTTGATTCTATCTCTAAGATCCACCCTCCAAGGGAGGCACAGAGACTTAAAGTTAGGTCTAACAAAATCCAAGCAACTGTTAAGAAGCAGCTCATAAATAGGTTTAAAGATAGTATTATTGAGGGTCAAACATACCAAATGTCATATTTTAGTGTTGTTCCAAACCAAGGCAATTATAGGGCAGTAGAACATGAGTTTAAGTTAGTTTTCCTTAACCGTACAACTGTTATTCCTGTTCCTGATGATGCTATCCCAAAGACATGTTTCAGTTTCTATCCATTTGATGAGCTCTTAAAAATGACTGAAGATTACGTTTACTTAGTTGATATTATTGGTTTTCTAACTTATGTTGGTGAAGAGAAAGGATATGTGAAAGATGCAAAG 396 0.351 MPHLFDSISKIHPPREAQRLKVRSNKIQATVKKQLINRFKDSIIEGQTYQMSYFSVVPNQGNYRAVEHEFKLVFLNRTTVIPVPDDAIPKTCFSFYPFDELLKMTEDYVYLVDIIGFLTYVGEEKGYVKDAK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2073 132 Gene3D - 8 86 IPR012340 -
Amo01g2073 132 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 25 108 - -
Amo01g2073 132 Pfam Domain of unknown function DUF223 25 105 IPR003871 -
Amo01g2073 132 SUPERFAMILY Nucleic acid-binding proteins 24 86 IPR012340 -
Amo01g2073 132 CDD RPA1_DBD_A_like 25 80 - -
Amo01g2073 132 PANTHER DNA BINDING PROTEIN-LIKE 25 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2073 Amo-Chr1 60123238 60123960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2073 24 121 Core DNA Replication Machinery Family AT2G06510 30.000 1.59e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2073 - - adu:107489369 223.016