Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2043 GTTGCTGCTACCACTCCTATAGTTGGGTCCCATGTTTGGGTTGAGGATTCTGAAGTAGCATGGATAGATAGTGAAGTCTTGGAGGTTAATGAAGAAGAAGTTAAACTTAATGAAACTATTGTTTTTGTATTGCAATATGCCCATACTTTAATTTTCCTTGAAATTCATGTTGTTGTTAAAGTGTCTTGTATTTATCATAAAGACACTGAAGTTCCGCCAAGTAGAGTAGATGATATGACAAAGCTTGCATACCTACACAAACCTGGTGTACTAGAAAATTTGAGATCAAGATATGATATCAATGAAATTTACATTGCGGTGAACCCTTTCGTAAAGCTTCCTCATTTATATGATAGTCATATGATGGCACAATATAAAGGAGTAGTGTTTGGTGAGCTAAGTCCACATCCGTTTGCCGTTGCAGATGCTGCATAT 435 0.3655 VAATTPIVGSHVWVEDSEVAWIDSEVLEVNEEEVKLNETIVFVLQYAHTLIFLEIHVVVKVSCIYHKDTEVPPSRVDDMTKLAYLHKPGVLENLRSRYDINEIYIAVNPFVKLPHLYDSHMMAQYKGVVFGELSPHPFAVADAAY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2043 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 145 IPR027417 -
Amo01g2043 145 Gene3D Kinesin motor domain 11 145 IPR036961 -
Amo01g2043 145 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 7 69 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo01g2043 145 PANTHER MYOSIN-7 5 145 - -
Amo01g2043 145 Pfam Myosin head (motor domain) 76 145 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo01g2043 145 ProSiteProfiles Myosin motor domain profile. 74 145 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo01g2043 145 PANTHER MYOSIN 5 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2043 Amo-Chr1 59065906 59066487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2043 1 145 Myosins gene family AT5G43900 61.184 1.18e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2043 K10357 - gmx:100819463 195.282