Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2027 ATGGCAATGGCTTCTTCTATTCCTCGTAAAATGTTGAGCATATTTTATTTTCTCTGCATTGGGATTCTCCTTTCTTCCTCATCATGGGTTCAAATTGCGAAAGCAAACGTGTGTCCAAGTCCCAGTAAAACATGGTCAGGACCTTGTTTTAACACGGGAGGCTGCAAAGATCAGTGCATAAGGCTTGAAAGTGCCGTCTTCGGAGCCTGCCACAGCTTGACTTGTTATTGCTACTACAACTGTCCCTAA 249 0.4378 MAMASSIPRKMLSIFYFLCIGILLSSSSWVQIAKANVCPSPSKTWSGPCFNTGGCKDQCIRLESAVFGACHSLTCYCYYNCP* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2027 82 PANTHER DEFENSIN-LIKE PROTEIN 1 6 81 - -
Amo01g2027 82 SUPERFAMILY Scorpion toxin-like 37 81 IPR036574 -
Amo01g2027 82 PANTHER DEFENSIN-LIKE PROTEIN 18-RELATED 6 81 - -
Amo01g2027 82 Pfam Gamma-thionin family 37 81 - -
Amo01g2027 82 SMART gth_4 37 81 IPR003614 GO:0006952
Amo01g2027 82 Gene3D - 37 81 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2027 Amo-Chr1 58053849 58054176 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2027 13 81 Plant Defensins Gene Families AT1G19610 42.466 6.16e-17 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2027 - - mtr:MTR_8g012775 80.8777