Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2021 ATGAAGCGAAACCTTGGATTTGTTCATCAACATGATCTCTTCTATTCTCACCTAACAGTCCATGAGACATTAGTCTTTTCGGCTCTTCTTCGCCTGCCAAACAGCCTCTCCAAACAAGAGAAAATCGCGCACGCTTGCGCGGTTATGGATGAACTTGACCTGAATCATTGTAAGGACACTATAATGGGAGGTCCACTCTTAAGAGGTGTGTCGGGTGGAGAACGGAAAAGGGTCAGCATAGGTCAAGAGTTGTTGACTAATCCTAGTCTTTTGCTTGTTGATGAACCAACTTCAGGGCTTGATTCGACAACTGCTCGGAGAATCGTGCTAATTCTGTGTGATTTGGCTAAATCTGGAAGGACTGTGGTAATGACTATTCATCAACCTTCTAGCAAGCTATTTTACATGTTCCCCAAGATTCTGCTGCTATCAGATGGTAGTACCTTGTACTTTGGGAAAGGAGAACTTGTCATGAATTACTTCTACAGCATTGGTTATGCTCCTTCTGTAGCCATGAATCCTACAGATTTCCTACTTGATCTTGCAAGCGGTATATATGCTGGAAATTTAGAAGATGAAGTTGAAGCTACAAAACAAGTGTTAAAATCAGCATTTGAAAGTAACCTTGCATCTCAAGTAAACATGGAACTCAAAAGCTCCAAGGTACCATTTCARAACACTTCAGGGGATGAAATGCTTGGCCAGTACTGCACAACATGGTGGCAACAATTRACTATATTAATAAACAGAGGTTTCAAAGAAAGGAAGTATGACCAATTTTCAATCCTCATAATCTGTAAAGTTTTGGCAGCATCAACCATTTCAGGCCTTGTTTGGTGGCAGGCCGGAGCTAATCAAACCAAAGACCTGGTGGGACTACTTTTCTACTACACACAAGTTAGTGCATACTTGCCTATGTTAGTGTCAATCTSCACCTTCCCTTYTGATCATGAAATGRTAATGAAGGAAAAATCTTGCTACATGTATAGACTCTCAACTTATGTCATGGCAAACAGTGTTGTTGAACTTCCAGCAGTGCTAGCAATGCCAACCATTTTTGTCACCATTACTTACTGGATGGTGGGGCTAAAACCAAATCCCTTAAATTTCTTCCAAACTCTAGCCATTGTTCTTCTCTATGCTTTGGTGTCACAGGGTATTGGTCTTGCCATTGGTGCAGTTGTGGTGAGTAATCAAAAGTTGGCTTCRAGAGTTGGATCGGTAGTCATGACTTTATATATTCTAAMCAATGGCTTCTARGTTCAGCATGTCCCAAGTTTTGTGTCATGGATTAAACACATATCTCATAGCTATTATGGTTATAAGCTATTGTTGGGGTCACAGTTTAAGGATAATGTTACATGCTCAGTTAGAGAARATCAYGTGATTCAGCATGTTGGTCTTGATCATCAAATTTTCTCTGTTTTTGCCTTGGTTGCAATGGTTCTAGTGTACAGGATTATTGCCTATTTTGCTCTCATGATTGTTGTCAAACATAGCTAG 1503 0.4005 MKRNLGFVHQHDLFYSHLTVHETLVFSALLRLPNSLSKQEKIAHACAVMDELDLNHCKDTIMGGPLLRGVSGGERKRVSIGQELLTNPSLLLVDEPTSGLDSTTARRIVLILCDLAKSGRTVVMTIHQPSSKLFYMFPKILLLSDGSTLYFGKGELVMNYFYSIGYAPSVAMNPTDFLLDLASGIYAGNLEDEVEATKQVLKSAFESNLASQVNMELKSSKVPFQNTSGDEMLGQYCTTWWQQLTILINRGFKERKYDQFSILIICKVLAASTISGLVWWQAGANQTKDLVGLLFYYTQVSAYLPMLVSIXTFPXDHEMXMKEKSCYMYRLSTYVMANSVVELPAVLAMPTIFVTITYWMVGLKPNPLNFFQTLAIVLLYALVSQGIGLAIGAVVVSNQKLASRVGSVVMTLYILXNGF*VQHVPSFVSWIKHISHSYYGYKLLLGSQFKDNVTCSVREXHVIQHVGLDHQIFSVFALVAMVLVYRIIAYFALMIVVKHS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2021 499 ProSitePatterns ABC transporters family signature. 70 84 IPR017871 GO:0005524
Amo01g2021 499 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 496 - -
Amo01g2021 499 Gene3D - 1 163 IPR027417 -
Amo01g2021 499 Pfam ABC-2 type transporter 127 202 IPR043926 GO:0140359
Amo01g2021 499 Pfam ABC-2 type transporter 242 448 IPR013525 GO:0016020|GO:0140359
Amo01g2021 499 Pfam ABC transporter 2 98 IPR003439 GO:0005524
Amo01g2021 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 162 IPR027417 -
Amo01g2021 499 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 1 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2021 Amo-Chr1 57793568 57795721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2021 1 131 Calmodulin-binding Proteins AT2G36910 29.630 1.63e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2021 K05681 - gmx:100800295 680.248