Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1973 ATGCAAATACTTCTCATTATCTTGCCAATCTTTTCCGTTTTGTTTCTGCTAATAAAATGGTATTCAAATTATTCCATAATCAGAAAAAACTCACTTCCTTCTCCACCGAAATTCCCAATAATAGGAAATCTCCATCAACTAGGTTTGTACCCTCATCGCACCCTCCAATCTCTGGCAAAAAAATATGGCCCCTTGATGTTGCTCCATCTTGGGAGGGTGCCGGTTCTTGTGGTCTCTTCCGCTGAAGGTGCACGTGAGATCATGAAAACCCATGATCTTGTATTTGCGAACAGGCCCCAAAGGAAATTGTTCGACATACTTATATATGGTTCCAAAGATGTGTCAACAGCCCCATATGGTGAGTACTGGAGGCAATTAAGGAGCATCTGTGTGTTGCATCTGCTTAGTGTAAAAAGGGTTCAATCATTTCGCTCCGTTAGAGAGGAGGAAACTCAAATCATGATGGAACAAGTCAAACATTCTACTTCACCATCTGTTCCAATAGATTTGAGCCAATTATTCTCCATGATTACCAATGACATACTTTGTAGGGTCACTTTCGGAAGAAAGTATGGTGGAGAAAGTGGGAAGGAGTTGAAGGAGTTGTTCATGGAGTTTACAGAACTTCTTGGTAGTTTTGTTATTGGAGAGTTTGTGCCTTGGCTTGATTGGTTGACTAGTGTTTCTGGGTTGTACACTAGAGCAAACAGAGTAGCTACAAGGTTCGATAAATTCTTGGAGGAAGTAGTTGATCACCATGTGAATCGATATCCAGATGATGTTACTAGCAATTTGGATCATGTTGGATCAGATTCTCAAGGCCACAATGATTTTGTTGATGTATTGCTTTTTCTCCAGAGGACAAATGCAACTGGATTTCCTATTAATAGAACAGTCATCAAGTGTTTGATATTGGATGTGTTTGTTGCCGGTGCAGACACTACATCTACCATCTTAGAGTGGACAATGACAGAGCTCTTAAGGCATCCAATGGTGTTGAAGAAAGTGAAAGATGAAGCCAAAAACGTGGTTGGTAACAGAAAGAACATAACTGAAGATGATTTGGTTCACATGCACTACTTAAAAGCCGTGATTAAAGAAACTCTTCGACTACATCCACCAATTCCGTTACTAGTCCCACGAGAAAGCATGCAAGATATCAAACTGCAAGATTACAACATTGCTTCGGGAACACGAGTAATTGTGAACGCTTGGGCAATAGCAAGAGATCCTAAGTATTGGGACCGACCTGAAGAGTTCGCACCGGAGAGGTTCATGAATAGTTATATAGACGTGAAAGGGAATGATTTCGAGTTGATTCCGTTCGGAGCAGGGAGAAGGGGCTGCCCGGGAACAATATTTGCCATGGTTATTGTTGAGATTGTGCTAGCCAACCTCCTTCACCAATTTGAATGGGTGTTACCAGAGGGTGTGAAAAGTTTGGACATGTCTGAAACAGTTGGCTTAACCATTTATAGAAAGGTTCCTCTTGTAGCCCTTGCAACCCCAAAGAATTAA 1518 0.4137 MQILLIILPIFSVLFLLIKWYSNYSIIRKNSLPSPPKFPIIGNLHQLGLYPHRTLQSLAKKYGPLMLLHLGRVPVLVVSSAEGAREIMKTHDLVFANRPQRKLFDILIYGSKDVSTAPYGEYWRQLRSICVLHLLSVKRVQSFRSVREEETQIMMEQVKHSTSPSVPIDLSQLFSMITNDILCRVTFGRKYGGESGKELKELFMEFTELLGSFVIGEFVPWLDWLTSVSGLYTRANRVATRFDKFLEEVVDHHVNRYPDDVTSNLDHVGSDSQGHNDFVDVLLFLQRTNATGFPINRTVIKCLILDVFVAGADTTSTILEWTMTELLRHPMVLKKVKDEAKNVVGNRKNITEDDLVHMHYLKAVIKETLRLHPPIPLLVPRESMQDIKLQDYNIASGTRVIVNAWAIARDPKYWDRPEEFAPERFMNSYIDVKGNDFELIPFGAGRRGCPGTIFAMVIVEIVLANLLHQFEWVLPEGVKSLDMSETVGLTIYRKVPLVALATPKN* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1973 505 PANTHER CYTOCHROME P450 71B11-RELATED 5 504 - -
Amo01g1973 505 SUPERFAMILY Cytochrome P450 33 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Amo01g1973 505 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 Gene3D Cytochrome P450 22 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo01g1973 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1973 Amo-Chr1 56179368 56182071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1973 28 502 Cytochrome P450 AT3G48270 51.255 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1973 - - gmx:100806940 642.114