Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1968 ATGCCTCTTCGAGTGCTCTATCACTCTCTGTCCAAGCTCACTCCCCTTCCTCCGTTGCCGTCACTTTCGATTCCTCCGCCGCCGTCACTTGCCTTCCTCCTTCGCCGCCGGCAATTCGCTCAACGTTTACGAGTCCGTAAACTTCAATACATAGCTGAATTAGAAAGAAATGTACAAGGTTTACAGGCAGAAGGATTTGAAGTATCTGCCGAGCTTGAATTTCTTAACCAGCAGAATCTCATCCTGAGTATGGAGAACAAAGCTCTCAAGCAACGATCCTGCGTTTGGAATATGCATAAACTTACCATGCACTTTTCTGTTCTCAAAAGGCATAGGTCTTGTTATTGA 348 0.4598 MPLRVLYHSLSKLTPLPPLPSLSIPPPPSLAFLLRRRQFAQRLRVRKLQYIAELERNVQGLQAEGFEVSAELEFLNQQNLILSMENKALKQRSCVWNMHKLTMHFSVLKRHRSCY* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1968 115 CDD bZIP_plant_RF2 36 79 IPR044759 GO:0003700|GO:0006355
Amo01g1968 115 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 36 92 IPR044797 -
Amo01g1968 115 Gene3D - 32 88 - -
Amo01g1968 115 Coils Coil 44 92 - -
Amo01g1968 115 SUPERFAMILY Leucine zipper domain 33 82 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1968 Amo-Chr1 56011894 56012963 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1968 27 101 bZIP Transcription Factor Family AT2G42380 50.667 4.06e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1968 - - adu:107488415 137.887