Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1964 ATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAATAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACGACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTCCAGCCATTACTGAAAATTTGCAAGGAGGAATTGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGAATCTGCTTAGTTGGTAG 330 0.4364 MEVSKHMNHLLKAPFCVHPKIGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGEWNKTSLANAIKLFRSSFLQPLLKICKEELESSYNAKLQQSKNLLSW* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1964 109 SUPERFAMILY Prim-pol domain 2 53 - -
Amo01g1964 109 PANTHER DNA PRIMASE SMALL SUBUNIT 1 109 IPR014052 GO:0003896|GO:0006269
Amo01g1964 109 Gene3D DNA primase, PRIM domain 1 90 - -
Amo01g1964 109 PANTHER DNA PRIMASE 1 109 - -
Amo01g1964 109 Pfam DNA primase small subunit 2 29 IPR002755 GO:0003896|GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1964 1 109 Core DNA Replication Machinery Family AT5G41880 66.364 2.49e-45 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1964 K02684 - gmx:100780574 186.037