Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo01g1963 | ATGTTGGATACTTTTGGAAGAATTCTGATGTCTAGTTTAAATGTATTACAGCCTGCACATAGGAATGCTTCTGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGATTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGA | 324 | 0.3951 | MLDTFGRILMSSLNVLQPAHRNASAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMIVAVKVIDTSLRDDFGFRHILWVYSGRVVYIVGSVIERQDG* | 108 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo01g1963 | 107 | SUPERFAMILY | Prim-pol domain | 28 | 93 | - | - | |
| Amo01g1963 | 107 | Gene3D | DNA primase, PRIM domain | 6 | 97 | - | - | |
| Amo01g1963 | 107 | PANTHER | DNA PRIMASE SMALL SUBUNIT | 17 | 93 | IPR014052 | GO:0003896|GO:0006269 | |
| Amo01g1963 | 107 | Pfam | DNA primase small subunit | 39 | 93 | IPR002755 | GO:0003896|GO:0006269 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo01g1963 | 20 | 93 | Core DNA Replication Machinery Family | AT5G41880 | 77.027 | 1.11e-41 | 140 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo01g1963 | K02684 | - | dcr:108201947 | 142.124 |