Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1959 ATGGGAGGAGCCACCGCGCAACAGCAGGAGTTAGAGAACATAATCGAAAAAGTCAAAACTGCCCAAAGATGCAAACAAACCAGGCGGATCCTAAAGTCAACCCTAAAGGGTTCAAAGTCTCTTGTGTACGAAATCAAGCAATATAACAACGACCTTGATCAACCAAGAGATGAAATTAAAGCTCTGATCAAAGAAAATGGTGCAGCTCAAGATTCAGAATCGCCATGCTGCAATTGCTTCTCGTCTTGTTCCCTTTGGTTTGGTAAGTGCTTCTTTCATATCCCTTTCTACAGGATAAGATCGGTGCGGAGCGAGAGGAACAGTTATTGTGATGCGAAGGAGATGCTTTCGAATGTTAGGGACGTTCTTGAACTTCTTAGTAGACAGAATATCGAGAAGAGGCTTAGCGGCGGTTCGATTAAGCGTCGTCCTTGTGGTTTTCCTGAGAAACCGGGTTTTACTGTTGGATTGGATGAGCCTTTGAGGAGGCTGAAGGTGGAGGTTCTGATGGAGGGCGTTTCGGTAATTGTATTGACTGGACTTGGTGGTTCTGGAAAGACTACTCTGGCTACAATGCTCTGTTTTGATGAACAAGTCAAAGATAAATTCGATGAAAATATATTGTTTGTCACCTTCTCCAAAAATCCCAAGTTGAAGACCATTGTAGAGAGACTATTTGAACAATGTGGATATCAAGTGCCTGAGTTTAAAAGCGACAATGATGCTGTTAACCAAATGGTAGTTTTATTGAGGCATATTGGGACAAGACCGACGTTGTTGGTCCTCGACGATGTTTGGCCTGGCTCAGAAGCCCTTGTTGAAAAATTTCAAATTCAAATGTCACAGTACAAGATTCTAGTGACTTCAAGGGTTGCATTTCCTAGATTCGCCTCTCACTTTATCCTAAAACCACTTAATCAAGAAGATGCATTGACGCTTTTCCATATTGTCCAAAAGGTTGTAAGTGGTTGCAAGGGTTCACCTCTTGCTATTATGGTGATGGCTAGATCCCTCAGTCGTCAACCTTACGGGTTTTGGCTCAAGATAGTAGAGAAATTGTCACAAGGTCATTCTATACTTGATTCTAATGCTGAATTGGTAAACTGTCTACAAAAGATCTTAGAAGTATTGCAGAATAAGCCCTTCATAAAGGAGTGTTTCATGGACTTAGGGTTATTCCCCGAAGATCAAAGAATCCCTGTCACTGCTCTCATTGATATATGGAAAGAATTGTATGGACTGGACGATGATGGCCAAGAAGCAATGACCATCATCAATATATTGGACTCCATGAATTTGGTTAAGCTCTCAGTAGCAAGGAAAAGTGTTTGTGGTGTAGACAATTACTATTACAATAACCACTTCCTCGTCCTACATGATCTTGTAAGAGAACTTGCAATTTATCAAAGCAATCAAGAACCAATTGAACGTAGACAGAGACTGATGATTGATGTGAATGAAAATGCTAGCCAACGGTGGCTCGGTAAGAAGCAGAAAGGCATGATGATGGCCCGCATTTCAAGTTATCTGACACGATGTGTTAAACAAAAGGCAGTACAAGTCACCGTCCGCACATTGTCAATATCAACTGATGAAGCTTACCCTTCTCTCTTGTCCAATGTGAAAACAGATGAAACTGAGGTTTTGATTGTTGATCTCCGAACAAAACAGTACTCGTTCCCAGAATCGATTGAAAAAATGAACAAACTAAAAGTTATCATTGTTACAAATTATGGTTTCCATCCATCAGAACTGAACAATTTTGAGAAACTCAGTTCCTTATCAAACCTGAGAAGAATCAGATTAGAGAGAATTTCTGCTCCTCCGCTTGTCATATTGAAGAATCTAAGAAAAATATCCCTCTACATGTGTAATATGACTCGGGTTTTCCAAAATGGCAACATCCCAATTTCGGAAGCATTTCCAAATCTAGTCGAATTGAGCATTGACTACTGCAAAGATATGGTTAAATTGCCTAATGAGTTGTGTGATATTACCCCACTAAAGAATATCAGCATTACAAATTGTCACAAGTTTAATGCACTTCCCCAAGACATTGGAAAGTTATCAAAGCTGGAACTTCTAAGGCTTAGTTGTTGTACTGATTTGCAAGGGTTACCGAATTCAATTGGAAGGCTGTCGATTCTGCGTCTTCTTGACATCTCAAACTGCATGAACCTTCCAGATTTACCAGAAGACATTGGAAATCTGCGTAGTCTGAGAAACCTTTACATGACAGGTTGTTCAAATTGCGAATTGCCGTTCTCAGTCGCCAATCTTGAGAATTTAAAAGTCATATGTGATGAAGAAACTGCTGCTTCATGGGAAGCTTTCATACCAATTATTCCGAATCTAAAGGTAGAGGTGCCTCAAGTTGATGTCAACTTAAATTGGCTTCACCCACTTAGCTCCTAA 2415 0.4029 MGGATAQQQELENIIEKVKTAQRCKQTRRILKSTLKGSKSLVYEIKQYNNDLDQPRDEIKALIKENGAAQDSESPCCNCFSSCSLWFGKCFFHIPFYRIRSVRSERNSYCDAKEMLSNVRDVLELLSRQNIEKRLSGGSIKRRPCGFPEKPGFTVGLDEPLRRLKVEVLMEGVSVIVLTGLGGSGKTTLATMLCFDEQVKDKFDENILFVTFSKNPKLKTIVERLFEQCGYQVPEFKSDNDAVNQMVVLLRHIGTRPTLLVLDDVWPGSEALVEKFQIQMSQYKILVTSRVAFPRFASHFILKPLNQEDALTLFHIVQKVVSGCKGSPLAIMVMARSLSRQPYGFWLKIVEKLSQGHSILDSNAELVNCLQKILEVLQNKPFIKECFMDLGLFPEDQRIPVTALIDIWKELYGLDDDGQEAMTIINILDSMNLVKLSVARKSVCGVDNYYYNNHFLVLHDLVRELAIYQSNQEPIERRQRLMIDVNENASQRWLGKKQKGMMMARISSYLTRCVKQKAVQVTVRTLSISTDEAYPSLLSNVKTDETEVLIVDLRTKQYSFPESIEKMNKLKVIIVTNYGFHPSELNNFEKLSSLSNLRRIRLERISAPPLVILKNLRKISLYMCNMTRVFQNGNIPISEAFPNLVELSIDYCKDMVKLPNELCDITPLKNISITNCHKFNALPQDIGKLSKLELLRLSCCTDLQGLPNSIGRLSILRLLDISNCMNLPDLPEDIGNLRSLRNLYMTGCSNCELPFSVANLENLKVICDEETAASWEAFIPIIPNLKVEVPQVDVNLNWLHPLSS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1959 804 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 9 790 IPR039203 GO:0050832
Amo01g1959 804 PRINTS Disease resistance protein signature 175 190 - -
Amo01g1959 804 PRINTS Disease resistance protein signature 711 727 - -
Amo01g1959 804 PRINTS Disease resistance protein signature 252 266 - -
Amo01g1959 804 PRINTS Disease resistance protein signature 324 338 - -
Amo01g1959 804 Coils Coil 45 65 - -
Amo01g1959 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 390 IPR027417 -
Amo01g1959 804 Gene3D - 370 467 IPR036388 -
Amo01g1959 804 CDD ABC_ATPase 175 265 - -
Amo01g1959 804 SUPERFAMILY L domain-like 557 766 - -
Amo01g1959 804 Gene3D - 296 368 IPR042197 -
Amo01g1959 804 Pfam NB-ARC domain 163 290 IPR002182 GO:0043531
Amo01g1959 804 Gene3D - 142 294 IPR027417 -
Amo01g1959 804 Gene3D Ribonuclease Inhibitor 488 775 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1959 Amo-Chr1 55340057 55344130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1959 563 743 WRKY Transcription Factor Family AT4G12020 26.794 8.93e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1959 - - gmx:100816134 914.45