Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g1937 ATGGCAGATATTGTGCAGATAATCCAAGCCTTTTTAAAAATGCCGATGAGCAAAGAACGAACAGAAATTGAATACTGTTGTCTATACTTCACTTATGGATACTGCTTTGGTGTGGAGTTGACTATTGATAACATTATAGCTGAGTACTTCTATGACAGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCATGCACTATGTTGGGACTTTGGAAGATGGAACCAAGTTTGATTCCAGTAGAGATAAAGATCAACCTATAAAGTTCACTCTTGGTCAAGCCTCATTCTTCCAATATCAGCTTGGAAATGGAATACTCAGTGGATTTAATTGTGCTGGAAGGTGGCCTTCAAAGCGAAATTTGAATGATCCAGAAAATGCAATTATTGGTGCATTTGCAGGTGCACTAACTGGATCTATAATAACTCCCCTTGATGTCATCAAGACAAGATTACTGGTTCAGGGATCTGCAAACCAATATAATAGAATCGTAGATTGTGTTCAAACAATTATCAAGGAAGAAGGACCTAGTGCACTTTTAAAGAATATTTGTGACCGTGTGAGGAAAGCTGGGATGATGAAGATGAAGCAGCAGCAGAAAGAGCAAGTGAAGTGA 621 0.3913 MADIVQIIQAFLKMPMSKERTEIEYCCLYFTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAAMHYVGTLEDGTKFDSSRDKDQPIKFTLGQASFFQYQLGNGILSGFNCAGRWPSKRNLNDPENAIIGAFAGALTGSIITPLDVIKTRLLVQGSANQYNRIVDCVQTIIKEEGPSALLKNICDRVRKAGMMKMKQQQKEQVK* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g1937 206 Gene3D Mitochondrial carrier domain 96 199 IPR023395 -
Amo01g1937 206 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 112 IPR001179 GO:0003755
Amo01g1937 206 Pfam Mitochondrial carrier protein 127 183 IPR018108 -
Amo01g1937 206 Gene3D - 57 95 IPR046357 GO:0003755
Amo01g1937 206 Coils Coil 195 206 - -
Amo01g1937 206 SUPERFAMILY FKBP-like 59 95 - -
Amo01g1937 206 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 118 193 - -
Amo01g1937 206 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 206 IPR018108 -
Amo01g1937 206 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 61 98 IPR001179 GO:0003755
Amo01g1937 206 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 118 193 - -
Amo01g1937 206 SUPERFAMILY Mitochondrial carrier 116 190 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g1937 Amo-Chr1 54622849 54625796 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g1937 32 66 Inorganic Solute Cotransporters AT1G12940 91.429 2.35e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g1937 K15111 - aip:107643617 131.339